Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 AC080080.1-201ENST00000625121 2420 ntBASIC14.44□□□□□ -0.1
SPCS3P61009 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.44□□□□□ -0.1
SPCS3P61009 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SPCS3P61009 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SPCS3P61009 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SPCS3P61009 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 KRT18P29-201ENST00000397031 1267 ntBASIC14.44□□□□□ -0.1
SPCS3P61009 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC14.44□□□□□ -0.1
SPCS3P61009 AC010240.3-201ENST00000607688 395 ntBASIC14.44□□□□□ -0.1
SPCS3P61009 ITM2C-210ENST00000620962 501 ntBASIC14.44□□□□□ -0.1
SPCS3P61009 AC113410.3-201ENST00000623366 203 ntBASIC14.44□□□□□ -0.1
SPCS3P61009 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SPCS3P61009 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SPCS3P61009 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SPCS3P61009 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 AD000864.1-201ENST00000624076 2295 ntBASIC14.44□□□□□ -0.1
SPCS3P61009 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPCS3P61009 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 LINC00602-201ENST00000629776 2065 ntBASIC14.43□□□□□ -0.1
SPCS3P61009 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SPCS3P61009 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS3P61009 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPCS3P61009 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.43□□□□□ -0.1
SPCS3P61009 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SPCS3P61009 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.43□□□□□ -0.1
SPCS3P61009 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS3P61009 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS3P61009 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS3P61009 UBE2SP1-201ENST00000450587 669 ntBASIC14.43□□□□□ -0.1
SPCS3P61009 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS3P61009 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.43□□□□□ -0.1
SPCS3P61009 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS3P61009 AC233702.5-201ENST00000584107 538 ntBASIC14.43□□□□□ -0.1
SPCS3P61009 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPCS3P61009 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS3P61009 AC116407.2-201ENST00000613639 860 ntBASIC14.43□□□□□ -0.1
SPCS3P61009 AL049637.2-201ENST00000641778 930 ntBASIC14.43□□□□□ -0.1
SPCS3P61009 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SPCS3P61009 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.43□□□□□ -0.1
SPCS3P61009 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SPCS3P61009 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SPCS3P61009 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SPCS3P61009 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPCS3P61009 AP001094.4-201ENST00000579008 2176 ntBASIC14.43□□□□□ -0.1
SPCS3P61009 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SPCS3P61009 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 AC132938.6-201ENST00000623828 1655 ntBASIC14.42□□□□□ -0.1
SPCS3P61009 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.42□□□□□ -0.1
SPCS3P61009 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.42□□□□□ -0.1
SPCS3P61009 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.42□□□□□ -0.1
SPCS3P61009 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.42□□□□□ -0.1
SPCS3P61009 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPCS3P61009 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms