Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH12P55289 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH12P55289 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH12P55289 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CDH12P55289 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH12P55289 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH12P55289 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CDH12P55289 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 AP000523.1-201ENST00000398242 1049 ntBASIC16.52■□□□□ 0.24
CDH12P55289 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
CDH12P55289 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH12P55289 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH12P55289 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CDH12P55289 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH12P55289 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.52■□□□□ 0.24
CDH12P55289 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CDH12P55289 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.52■□□□□ 0.24
CDH12P55289 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
CDH12P55289 AL157888.1-201ENST00000631930 593 ntBASIC16.52■□□□□ 0.24
CDH12P55289 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CDH12P55289 AC066615.1-201ENST00000640911 628 ntBASIC16.52■□□□□ 0.24
CDH12P55289 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CDH12P55289 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.52■□□□□ 0.24
CDH12P55289 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH12P55289 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH12P55289 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH12P55289 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDH12P55289 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDH12P55289 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CDH12P55289 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH12P55289 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CDH12P55289 HLA-J-201ENST00000462773 1622 ntBASIC16.52■□□□□ 0.23
CDH12P55289 AL121761.2-201ENST00000598007 1648 ntBASIC16.52■□□□□ 0.23
CDH12P55289 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CDH12P55289 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CDH12P55289 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.52■□□□□ 0.23
CDH12P55289 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CDH12P55289 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDH12P55289 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.51■□□□□ 0.23
CDH12P55289 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH12P55289 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH12P55289 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH12P55289 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH12P55289 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH12P55289 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDH12P55289 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH12P55289 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDH12P55289 AC141257.4-201ENST00000634557 245 ntBASIC16.51■□□□□ 0.23
CDH12P55289 AC136944.6-201ENST00000634818 245 ntBASIC16.51■□□□□ 0.23
CDH12P55289 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CDH12P55289 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH12P55289 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH12P55289 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDH12P55289 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH12P55289 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH12P55289 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDH12P55289 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH12P55289 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH12P55289 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH12P55289 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH12P55289 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CDH12P55289 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH12P55289 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDH12P55289 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH12P55289 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH12P55289 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CDH12P55289 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 AC087499.1-201ENST00000418141 1075 ntBASIC16.5■□□□□ 0.23
CDH12P55289 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.5■□□□□ 0.23
CDH12P55289 PVRIG2P-201ENST00000435460 978 ntBASIC16.5■□□□□ 0.23
CDH12P55289 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH12P55289 AC145285.6-201ENST00000604632 637 ntBASIC16.5■□□□□ 0.23
CDH12P55289 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms