Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 AC100803.2-201ENST00000562459 1963 ntBASIC17.28■□□□□ 0.36
CSNK1EP49674 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1EP49674 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CSNK1EP49674 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1EP49674 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1EP49674 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1EP49674 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1EP49674 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CSNK1EP49674 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.28■□□□□ 0.36
CSNK1EP49674 HTR5BP-201ENST00000430851 1154 ntBASIC17.28■□□□□ 0.36
CSNK1EP49674 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1EP49674 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.28■□□□□ 0.36
CSNK1EP49674 AL078644.1-201ENST00000609881 752 ntBASIC17.28■□□□□ 0.36
CSNK1EP49674 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.28■□□□□ 0.36
CSNK1EP49674 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.28■□□□□ 0.36
CSNK1EP49674 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
CSNK1EP49674 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1EP49674 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.28■□□□□ 0.36
CSNK1EP49674 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CSNK1EP49674 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1EP49674 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1EP49674 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
CSNK1EP49674 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CSNK1EP49674 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1EP49674 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1EP49674 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1EP49674 GPR89P-201ENST00000407924 1495 ntBASIC17.27■□□□□ 0.36
CSNK1EP49674 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.27■□□□□ 0.36
CSNK1EP49674 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.27■□□□□ 0.36
CSNK1EP49674 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1EP49674 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CSNK1EP49674 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1EP49674 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.27■□□□□ 0.36
CSNK1EP49674 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1EP49674 STK19B-204ENST00000512515 211 ntBASIC17.27■□□□□ 0.36
CSNK1EP49674 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.27■□□□□ 0.36
CSNK1EP49674 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.27■□□□□ 0.36
CSNK1EP49674 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.27■□□□□ 0.36
CSNK1EP49674 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.27■□□□□ 0.36
CSNK1EP49674 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.27■□□□□ 0.36
CSNK1EP49674 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.27■□□□□ 0.36
CSNK1EP49674 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.27■□□□□ 0.36
CSNK1EP49674 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1EP49674 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CSNK1EP49674 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CSNK1EP49674 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1EP49674 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1EP49674 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1EP49674 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1EP49674 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1EP49674 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.27■□□□□ 0.35
CSNK1EP49674 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CSNK1EP49674 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CSNK1EP49674 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.27■□□□□ 0.35
CSNK1EP49674 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.27■□□□□ 0.35
CSNK1EP49674 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CSNK1EP49674 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1EP49674 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CSNK1EP49674 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1EP49674 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CSNK1EP49674 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.26■□□□□ 0.35
CSNK1EP49674 AC254562.1-201ENST00000417586 456 ntBASIC17.26■□□□□ 0.35
CSNK1EP49674 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.26■□□□□ 0.35
CSNK1EP49674 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1EP49674 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1EP49674 AC116407.2-201ENST00000613639 860 ntBASIC17.26■□□□□ 0.35
CSNK1EP49674 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1EP49674 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.26■□□□□ 0.35
CSNK1EP49674 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CSNK1EP49674 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1EP49674 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CSNK1EP49674 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSNK1EP49674 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.26■□□□□ 0.35
CSNK1EP49674 AC097637.2-201ENST00000624096 1997 ntBASIC17.26■□□□□ 0.35
CSNK1EP49674 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms