Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.69■□□□□ 0.58
CHKAP35790 FOSL1P1-201ENST00000511041 816 ntBASIC18.69■□□□□ 0.58
CHKAP35790 AC091304.2-201ENST00000564639 760 ntBASIC18.69■□□□□ 0.58
CHKAP35790 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.69■□□□□ 0.58
CHKAP35790 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.69■□□□□ 0.58
CHKAP35790 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.69■□□□□ 0.58
CHKAP35790 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.69■□□□□ 0.58
CHKAP35790 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHKAP35790 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHKAP35790 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.69■□□□□ 0.58
CHKAP35790 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.69■□□□□ 0.58
CHKAP35790 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.69■□□□□ 0.58
CHKAP35790 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHKAP35790 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.69■□□□□ 0.58
CHKAP35790 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHKAP35790 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHKAP35790 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHKAP35790 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHKAP35790 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CHKAP35790 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CHKAP35790 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.69■□□□□ 0.58
CHKAP35790 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 AC099336.1-202ENST00000602961 463 ntBASIC18.68■□□□□ 0.58
CHKAP35790 LINC00602-201ENST00000629776 2065 ntBASIC18.68■□□□□ 0.58
CHKAP35790 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
CHKAP35790 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CHKAP35790 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CHKAP35790 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.67■□□□□ 0.58
CHKAP35790 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.67■□□□□ 0.58
CHKAP35790 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.67■□□□□ 0.58
CHKAP35790 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.67■□□□□ 0.58
CHKAP35790 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CHKAP35790 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.67■□□□□ 0.58
CHKAP35790 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.67■□□□□ 0.58
CHKAP35790 MINOS1P3-201ENST00000457048 203 ntBASIC18.67■□□□□ 0.58
CHKAP35790 AC068472.1-201ENST00000474589 881 ntBASIC18.67■□□□□ 0.58
CHKAP35790 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 AL121894.2-201ENST00000602977 491 ntBASIC18.67■□□□□ 0.58
CHKAP35790 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.67■□□□□ 0.58
CHKAP35790 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CHKAP35790 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.67■□□□□ 0.58
CHKAP35790 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
CHKAP35790 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.67■□□□□ 0.58
CHKAP35790 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CHKAP35790 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.67■□□□□ 0.58
CHKAP35790 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CHKAP35790 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHKAP35790 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CHKAP35790 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CHKAP35790 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHKAP35790 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHKAP35790 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHKAP35790 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHKAP35790 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.66■□□□□ 0.58
CHKAP35790 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHKAP35790 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHKAP35790 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHKAP35790 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CHKAP35790 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHKAP35790 NSUN5P1-202ENST00000421140 1535 ntBASIC18.66■□□□□ 0.58
CHKAP35790 NSUN5P2-203ENST00000457352 1529 ntBASIC18.66■□□□□ 0.58
CHKAP35790 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.66■□□□□ 0.58
CHKAP35790 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHKAP35790 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHKAP35790 AC004870.1-201ENST00000315132 882 ntBASIC18.66■□□□□ 0.58
CHKAP35790 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms