Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.17■□□□□ 0.82
CLCN1P35523 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.17■□□□□ 0.82
CLCN1P35523 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.17■□□□□ 0.82
CLCN1P35523 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.17■□□□□ 0.82
CLCN1P35523 AP001412.1-201ENST00000608405 714 ntBASIC20.17■□□□□ 0.82
CLCN1P35523 AC068587.9-201ENST00000641814 219 ntBASIC20.17■□□□□ 0.82
CLCN1P35523 AL662844.4-201ENST00000606367 2838 ntBASIC20.17■□□□□ 0.82
CLCN1P35523 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CLCN1P35523 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 KRT8P32-201ENST00000512863 1461 ntBASIC20.17■□□□□ 0.82
CLCN1P35523 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.17■□□□□ 0.82
CLCN1P35523 AC104640.1-201ENST00000562617 2109 ntBASIC20.17■□□□□ 0.82
CLCN1P35523 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CLCN1P35523 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN1P35523 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN1P35523 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.16■□□□□ 0.82
CLCN1P35523 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN1P35523 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLCN1P35523 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN1P35523 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.16■□□□□ 0.82
CLCN1P35523 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN1P35523 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN1P35523 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.16■□□□□ 0.82
CLCN1P35523 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.16■□□□□ 0.82
CLCN1P35523 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.16■□□□□ 0.82
CLCN1P35523 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CLCN1P35523 REXO1L10P-201ENST00000615707 1290 ntBASIC20.16■□□□□ 0.82
CLCN1P35523 REXO1L12P-201ENST00000622156 912 ntBASIC20.16■□□□□ 0.82
CLCN1P35523 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.16■□□□□ 0.82
CLCN1P35523 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
CLCN1P35523 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CLCN1P35523 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CLCN1P35523 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
CLCN1P35523 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 AC099063.4-201ENST00000641099 1602 ntBASIC20.16■□□□□ 0.82
CLCN1P35523 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CLCN1P35523 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CLCN1P35523 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CLCN1P35523 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.15■□□□□ 0.82
CLCN1P35523 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CLCN1P35523 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLCN1P35523 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
CLCN1P35523 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CLCN1P35523 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.15■□□□□ 0.82
CLCN1P35523 AC008550.1-201ENST00000511500 884 ntBASIC20.15■□□□□ 0.82
CLCN1P35523 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCN1P35523 AC096733.2-201ENST00000609937 1394 ntBASIC20.15■□□□□ 0.82
CLCN1P35523 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.15■□□□□ 0.82
CLCN1P35523 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CLCN1P35523 AL513523.2-202ENST00000427283 2040 ntBASIC20.15■□□□□ 0.82
CLCN1P35523 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CLCN1P35523 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CLCN1P35523 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CLCN1P35523 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CLCN1P35523 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CLCN1P35523 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
CLCN1P35523 CYP2T1P-202ENST00000641596 2535 ntBASIC20.14■□□□□ 0.82
CLCN1P35523 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.14■□□□□ 0.81
CLCN1P35523 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCN1P35523 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CLCN1P35523 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CLCN1P35523 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.14■□□□□ 0.81
CLCN1P35523 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.14■□□□□ 0.81
CLCN1P35523 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CLCN1P35523 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms