Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.73■□□□□ 0.59
CTNNA1P35221 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNNA1P35221 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTNNA1P35221 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CTNNA1P35221 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.73■□□□□ 0.59
CTNNA1P35221 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.73■□□□□ 0.59
CTNNA1P35221 GCSHP2-201ENST00000560971 527 ntBASIC18.73■□□□□ 0.59
CTNNA1P35221 AL138966.2-201ENST00000621997 464 ntBASIC18.73■□□□□ 0.59
CTNNA1P35221 AC141257.4-201ENST00000634557 245 ntBASIC18.73■□□□□ 0.59
CTNNA1P35221 AC136944.6-201ENST00000634818 245 ntBASIC18.73■□□□□ 0.59
CTNNA1P35221 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.73■□□□□ 0.59
CTNNA1P35221 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.73■□□□□ 0.59
CTNNA1P35221 CROCCP2-202ENST00000412962 2773 ntBASIC18.73■□□□□ 0.59
CTNNA1P35221 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.73■□□□□ 0.59
CTNNA1P35221 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CTNNA1P35221 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CTNNA1P35221 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.73■□□□□ 0.59
CTNNA1P35221 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CTNNA1P35221 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.72■□□□□ 0.59
CTNNA1P35221 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CTNNA1P35221 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.72■□□□□ 0.59
CTNNA1P35221 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CTNNA1P35221 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.72■□□□□ 0.59
CTNNA1P35221 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.72■□□□□ 0.59
CTNNA1P35221 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.72■□□□□ 0.59
CTNNA1P35221 KRT18P65-201ENST00000439811 1286 ntBASIC18.72■□□□□ 0.59
CTNNA1P35221 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.72■□□□□ 0.59
CTNNA1P35221 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.72■□□□□ 0.59
CTNNA1P35221 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.72■□□□□ 0.59
CTNNA1P35221 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.72■□□□□ 0.59
CTNNA1P35221 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
CTNNA1P35221 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.72■□□□□ 0.59
CTNNA1P35221 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CTNNA1P35221 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CTNNA1P35221 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.71■□□□□ 0.59
CTNNA1P35221 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
CTNNA1P35221 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNNA1P35221 KRT8P47-201ENST00000604727 1398 ntBASIC18.71■□□□□ 0.59
CTNNA1P35221 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CTNNA1P35221 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNNA1P35221 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.71■□□□□ 0.59
CTNNA1P35221 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.71■□□□□ 0.59
CTNNA1P35221 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.71■□□□□ 0.59
CTNNA1P35221 AC034232.1-201ENST00000506026 1064 ntBASIC18.71■□□□□ 0.59
CTNNA1P35221 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.71■□□□□ 0.59
CTNNA1P35221 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNNA1P35221 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNNA1P35221 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNNA1P35221 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
CTNNA1P35221 AC024563.2-201ENST00000603282 481 ntBASIC18.71■□□□□ 0.59
CTNNA1P35221 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.71■□□□□ 0.59
CTNNA1P35221 LINC01451-201ENST00000623792 534 ntBASIC18.71■□□□□ 0.59
CTNNA1P35221 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.71■□□□□ 0.59
CTNNA1P35221 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CTNNA1P35221 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CTNNA1P35221 KRT18P22-201ENST00000402024 1347 ntBASIC18.71■□□□□ 0.59
CTNNA1P35221 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
CTNNA1P35221 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
CTNNA1P35221 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.58
CTNNA1P35221 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNNA1P35221 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNNA1P35221 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTNNA1P35221 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNNA1P35221 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNNA1P35221 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CTNNA1P35221 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CTNNA1P35221 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.7■□□□□ 0.58
CTNNA1P35221 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CTNNA1P35221 DDX43P3-201ENST00000441064 443 ntBASIC18.7■□□□□ 0.58
CTNNA1P35221 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CTNNA1P35221 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.7■□□□□ 0.58
CTNNA1P35221 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CTNNA1P35221 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.7■□□□□ 0.58
CTNNA1P35221 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.7■□□□□ 0.58
CTNNA1P35221 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CTNNA1P35221 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.7■□□□□ 0.58
CTNNA1P35221 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.7■□□□□ 0.58
CTNNA1P35221 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms