Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
RFX1P22670 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX1P22670 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
RFX1P22670 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.29■□□□□ 0.68
RFX1P22670 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
RFX1P22670 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.29■□□□□ 0.68
RFX1P22670 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.29■□□□□ 0.68
RFX1P22670 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
RFX1P22670 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.29■□□□□ 0.68
RFX1P22670 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RFX1P22670 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RFX1P22670 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.28■□□□□ 0.68
RFX1P22670 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RFX1P22670 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RFX1P22670 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RFX1P22670 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RFX1P22670 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.28■□□□□ 0.68
RFX1P22670 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.28■□□□□ 0.68
RFX1P22670 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.28■□□□□ 0.68
RFX1P22670 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.28■□□□□ 0.68
RFX1P22670 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.28■□□□□ 0.68
RFX1P22670 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.28■□□□□ 0.68
RFX1P22670 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.28■□□□□ 0.68
RFX1P22670 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.28■□□□□ 0.68
RFX1P22670 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RFX1P22670 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RFX1P22670 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.28■□□□□ 0.68
RFX1P22670 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RFX1P22670 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
RFX1P22670 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX1P22670 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RFX1P22670 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RFX1P22670 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX1P22670 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.27■□□□□ 0.68
RFX1P22670 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.27■□□□□ 0.68
RFX1P22670 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
RFX1P22670 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 MIR662-201ENST00000384847 95 ntBASIC19.27■□□□□ 0.68
RFX1P22670 IGHGP-201ENST00000390555 1178 ntBASIC19.27■□□□□ 0.68
RFX1P22670 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.27■□□□□ 0.68
RFX1P22670 AP002469.2-201ENST00000531724 424 ntBASIC19.27■□□□□ 0.68
RFX1P22670 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.27■□□□□ 0.68
RFX1P22670 TPSP2-201ENST00000561760 610 ntBASIC19.27■□□□□ 0.68
RFX1P22670 AC104692.2-201ENST00000603054 253 ntBASIC19.27■□□□□ 0.68
RFX1P22670 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.27■□□□□ 0.68
RFX1P22670 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RFX1P22670 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.27■□□□□ 0.68
RFX1P22670 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX1P22670 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX1P22670 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.27■□□□□ 0.68
RFX1P22670 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RFX1P22670 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RFX1P22670 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RFX1P22670 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
RFX1P22670 AC020916.1-201ENST00000587762 1774 ntBASIC19.27■□□□□ 0.67
RFX1P22670 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RFX1P22670 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms