Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 AC116407.2-201ENST00000613639 860 ntBASIC16.46■□□□□ 0.23
TNFRSF1BP20333 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNFRSF1BP20333 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TNFRSF1BP20333 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.46■□□□□ 0.22
TNFRSF1BP20333 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 AL512604.3-201ENST00000569583 964 ntBASIC16.45■□□□□ 0.22
TNFRSF1BP20333 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 LINC01451-201ENST00000623792 534 ntBASIC16.45■□□□□ 0.22
TNFRSF1BP20333 AC079602.3-201ENST00000623931 403 ntBASIC16.45■□□□□ 0.22
TNFRSF1BP20333 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.45■□□□□ 0.22
TNFRSF1BP20333 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 AC106886.4-201ENST00000623557 2502 ntBASIC16.44■□□□□ 0.22
TNFRSF1BP20333 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 LINC01568-207ENST00000641790 1380 ntBASIC16.44■□□□□ 0.22
TNFRSF1BP20333 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 AC113404.2-201ENST00000507884 177 ntBASIC16.44■□□□□ 0.22
TNFRSF1BP20333 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 AC024563.2-201ENST00000603282 481 ntBASIC16.44■□□□□ 0.22
TNFRSF1BP20333 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TNFRSF1BP20333 AL023973.1-201ENST00000624619 620 ntBASIC16.44■□□□□ 0.22
TNFRSF1BP20333 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms