Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 FLYWCH1P1-201ENST00000460917 1874 ntBASIC21.45■■□□□ 1.02
COL11A2P13942 AC093677.2-201ENST00000600169 1863 ntBASIC21.45■■□□□ 1.02
COL11A2P13942 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
COL11A2P13942 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.44■■□□□ 1.02
COL11A2P13942 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.44■■□□□ 1.02
COL11A2P13942 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 AC026120.1-201ENST00000611536 926 ntBASIC21.44■■□□□ 1.02
COL11A2P13942 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.44■■□□□ 1.02
COL11A2P13942 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
COL11A2P13942 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.44■■□□□ 1.02
COL11A2P13942 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
COL11A2P13942 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
COL11A2P13942 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
COL11A2P13942 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
COL11A2P13942 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.44■■□□□ 1.02
COL11A2P13942 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
COL11A2P13942 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.43■■□□□ 1.02
COL11A2P13942 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.43■■□□□ 1.02
COL11A2P13942 AC002472.2-201ENST00000442739 958 ntBASIC21.43■■□□□ 1.02
COL11A2P13942 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC21.43■■□□□ 1.02
COL11A2P13942 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.43■■□□□ 1.02
COL11A2P13942 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
COL11A2P13942 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
COL11A2P13942 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.43■■□□□ 1.02
COL11A2P13942 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC21.43■■□□□ 1.02
COL11A2P13942 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.43■■□□□ 1.02
COL11A2P13942 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
COL11A2P13942 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.43■■□□□ 1.02
COL11A2P13942 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.43■■□□□ 1.02
COL11A2P13942 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 AF228730.6-201ENST00000641497 218 ntBASIC21.43■■□□□ 1.02
COL11A2P13942 AC084121.3-201ENST00000641716 218 ntBASIC21.43■■□□□ 1.02
COL11A2P13942 AC105233.6-201ENST00000642093 218 ntBASIC21.43■■□□□ 1.02
COL11A2P13942 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
COL11A2P13942 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.43■■□□□ 1.02
COL11A2P13942 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL11A2P13942 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A2P13942 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A2P13942 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A2P13942 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.42■■□□□ 1.02
COL11A2P13942 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A2P13942 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A2P13942 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A2P13942 FAM58DP-201ENST00000428076 619 ntBASIC21.42■■□□□ 1.02
COL11A2P13942 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.42■■□□□ 1.02
COL11A2P13942 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A2P13942 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A2P13942 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A2P13942 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A2P13942 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.42■■□□□ 1.02
COL11A2P13942 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC21.42■■□□□ 1.02
COL11A2P13942 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A2P13942 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A2P13942 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A2P13942 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.42■■□□□ 1.02
COL11A2P13942 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A2P13942 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A2P13942 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A2P13942 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL11A2P13942 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.42■■□□□ 1.02
COL11A2P13942 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.41■■□□□ 1.02
COL11A2P13942 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COL11A2P13942 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.41■■□□□ 1.02
COL11A2P13942 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC21.41■■□□□ 1.02
COL11A2P13942 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.41■■□□□ 1.02
COL11A2P13942 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.41■■□□□ 1.02
COL11A2P13942 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL11A2P13942 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.41■■□□□ 1.02
COL11A2P13942 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.41■■□□□ 1.02
COL11A2P13942 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms