Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AC010203.1-204ENST00000548782 407 ntBASIC19.17■□□□□ 0.66
CCDC172P0C7W6 AL441883.1-201ENST00000566170 1045 ntBASIC19.17■□□□□ 0.66
CCDC172P0C7W6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 AL023806.1-201ENST00000603994 1649 ntBASIC19.17■□□□□ 0.66
CCDC172P0C7W6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC172P0C7W6 AL596257.1-201ENST00000641463 2694 ntBASIC19.17■□□□□ 0.66
CCDC172P0C7W6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 TSPY12P-201ENST00000421279 868 ntBASIC19.16■□□□□ 0.66
CCDC172P0C7W6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 AC079602.3-201ENST00000623931 403 ntBASIC19.16■□□□□ 0.66
CCDC172P0C7W6 AC073912.3-201ENST00000624414 853 ntBASIC19.16■□□□□ 0.66
CCDC172P0C7W6 AC133561.5-201ENST00000635547 218 ntBASIC19.16■□□□□ 0.66
CCDC172P0C7W6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC172P0C7W6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 AC084018.2-201ENST00000613093 2607 ntBASIC19.15■□□□□ 0.66
CCDC172P0C7W6 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.15■□□□□ 0.66
CCDC172P0C7W6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 AC097493.4-201ENST00000641197 219 ntBASIC19.15■□□□□ 0.66
CCDC172P0C7W6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 AC009949.1-201ENST00000623048 1830 ntBASIC19.15■□□□□ 0.66
CCDC172P0C7W6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 LINC00304-203ENST00000565008 1864 ntBASIC19.15■□□□□ 0.66
CCDC172P0C7W6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC172P0C7W6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC172P0C7W6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
CCDC172P0C7W6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.14■□□□□ 0.66
CCDC172P0C7W6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.14■□□□□ 0.65
CCDC172P0C7W6 AC011558.1-201ENST00000623459 338 ntBASIC19.14■□□□□ 0.65
CCDC172P0C7W6 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.14■□□□□ 0.65
CCDC172P0C7W6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms