Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 MTDHP4-201ENST00000600287 670 ntBASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 AL133373.2-201ENST00000623187 2828 ntBASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 PMPCAP1-201ENST00000508114 1576 ntBASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB40ALP0C0E4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 IGHV3-22-201ENST00000520721 359 ntBASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AC145285.3-201ENST00000564603 959 ntBASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AD001527.2-201ENST00000622994 785 ntBASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AC008735.5-201ENST00000623544 497 ntBASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AC107918.4-202ENST00000641623 219 ntBASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 AC079776.2-201ENST00000641154 1609 ntBASIC16.67■□□□□ 0.26
RAB40ALP0C0E4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 KRT8P47-201ENST00000604727 1398 ntBASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 COX5BP2-201ENST00000392354 334 ntBASIC16.66■□□□□ 0.26
RAB40ALP0C0E4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms