Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.8■□□□□ 0.12
SPARCP09486 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.8■□□□□ 0.12
SPARCP09486 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SPARCP09486 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.79■□□□□ 0.12
SPARCP09486 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SPARCP09486 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.79■□□□□ 0.12
SPARCP09486 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SPARCP09486 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.79■□□□□ 0.12
SPARCP09486 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SPARCP09486 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.79■□□□□ 0.12
SPARCP09486 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.79■□□□□ 0.12
SPARCP09486 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.79■□□□□ 0.12
SPARCP09486 KRT18P65-201ENST00000439811 1286 ntBASIC15.79■□□□□ 0.12
SPARCP09486 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.79■□□□□ 0.12
SPARCP09486 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.79■□□□□ 0.12
SPARCP09486 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SPARCP09486 AC010203.1-204ENST00000548782 407 ntBASIC15.79■□□□□ 0.12
SPARCP09486 AC066615.1-201ENST00000640911 628 ntBASIC15.79■□□□□ 0.12
SPARCP09486 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.79■□□□□ 0.12
SPARCP09486 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
SPARCP09486 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SPARCP09486 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.79■□□□□ 0.12
SPARCP09486 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SPARCP09486 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.78■□□□□ 0.12
SPARCP09486 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.78■□□□□ 0.12
SPARCP09486 AL391807.1-203ENST00000604392 2365 ntBASIC15.78■□□□□ 0.12
SPARCP09486 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
SPARCP09486 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.78■□□□□ 0.12
SPARCP09486 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.78■□□□□ 0.12
SPARCP09486 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.78■□□□□ 0.12
SPARCP09486 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SPARCP09486 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.78■□□□□ 0.12
SPARCP09486 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.78■□□□□ 0.12
SPARCP09486 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.78■□□□□ 0.12
SPARCP09486 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SPARCP09486 COX11P1-201ENST00000489116 835 ntBASIC15.78■□□□□ 0.12
SPARCP09486 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.78■□□□□ 0.12
SPARCP09486 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.78■□□□□ 0.12
SPARCP09486 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.78■□□□□ 0.12
SPARCP09486 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 AC079602.3-201ENST00000623931 403 ntBASIC15.78■□□□□ 0.12
SPARCP09486 AL031432.5-201ENST00000641059 760 ntBASIC15.78■□□□□ 0.12
SPARCP09486 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.78■□□□□ 0.12
SPARCP09486 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.78■□□□□ 0.12
SPARCP09486 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.78■□□□□ 0.12
SPARCP09486 LINC00304-203ENST00000565008 1864 ntBASIC15.78■□□□□ 0.12
SPARCP09486 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SPARCP09486 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.78■□□□□ 0.12
SPARCP09486 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SPARCP09486 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.77■□□□□ 0.12
SPARCP09486 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.77■□□□□ 0.12
SPARCP09486 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.77■□□□□ 0.12
SPARCP09486 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.77■□□□□ 0.12
SPARCP09486 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SPARCP09486 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.77■□□□□ 0.12
SPARCP09486 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SPARCP09486 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.77■□□□□ 0.12
SPARCP09486 AL441883.1-201ENST00000566170 1045 ntBASIC15.77■□□□□ 0.12
SPARCP09486 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.77■□□□□ 0.12
SPARCP09486 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SPARCP09486 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.77■□□□□ 0.12
SPARCP09486 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SPARCP09486 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.77■□□□□ 0.12
SPARCP09486 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SPARCP09486 AL138688.1-201ENST00000624851 1594 ntBASIC15.77■□□□□ 0.11
SPARCP09486 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SPARCP09486 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.77■□□□□ 0.11
SPARCP09486 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
SPARCP09486 KRT89P-201ENST00000620027 1478 ntBASIC15.77■□□□□ 0.11
SPARCP09486 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms