Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC13.76□□□□□ -0.21
CXCL1P09341 AC073111.5-205ENST00000641717 521 ntBASIC13.76□□□□□ -0.21
CXCL1P09341 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CXCL1P09341 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL1P09341 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL1P09341 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CXCL1P09341 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL1P09341 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
CXCL1P09341 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL1P09341 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL1P09341 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL1P09341 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL1P09341 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL1P09341 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CXCL1P09341 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.76□□□□□ -0.21
CXCL1P09341 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL1P09341 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL1P09341 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
CXCL1P09341 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CXCL1P09341 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.76□□□□□ -0.21
CXCL1P09341 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 GMCL1P1-201ENST00000463439 1581 ntBASIC13.75□□□□□ -0.21
CXCL1P09341 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 KRT8P3-201ENST00000519669 1449 ntBASIC13.75□□□□□ -0.21
CXCL1P09341 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 AC092171.3-201ENST00000610122 2651 ntBASIC13.75□□□□□ -0.21
CXCL1P09341 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CXCL1P09341 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CXCL1P09341 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCL1P09341 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CXCL1P09341 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCL1P09341 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC13.75□□□□□ -0.21
CXCL1P09341 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.75□□□□□ -0.21
CXCL1P09341 AC008687.6-201ENST00000596318 630 ntBASIC13.75□□□□□ -0.21
CXCL1P09341 AC080038.1-201ENST00000611274 1154 ntBASIC13.75□□□□□ -0.21
CXCL1P09341 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 MYC-209ENST00000641252 345 ntBASIC13.75□□□□□ -0.21
CXCL1P09341 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.75□□□□□ -0.21
CXCL1P09341 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
CXCL1P09341 KRT8P41-201ENST00000533985 1514 ntBASIC13.74□□□□□ -0.21
CXCL1P09341 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.74□□□□□ -0.21
CXCL1P09341 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 MIR663A-201ENST00000385250 93 ntBASIC13.74□□□□□ -0.21
CXCL1P09341 AC026185.1-201ENST00000445748 174 ntBASIC13.74□□□□□ -0.21
CXCL1P09341 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.74□□□□□ -0.21
CXCL1P09341 AC097658.1-201ENST00000475555 843 ntBASIC13.74□□□□□ -0.21
CXCL1P09341 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.74□□□□□ -0.21
CXCL1P09341 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CXCL1P09341 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 MIR4758-201ENST00000577688 71 ntBASIC13.74□□□□□ -0.21
CXCL1P09341 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC13.74□□□□□ -0.21
CXCL1P09341 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.74□□□□□ -0.21
CXCL1P09341 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.74□□□□□ -0.21
CXCL1P09341 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CXCL1P09341 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.74□□□□□ -0.21
CXCL1P09341 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms