Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
BEST1O76090 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.56■□□□□ 0.56
BEST1O76090 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
BEST1O76090 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
BEST1O76090 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
BEST1O76090 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.55■□□□□ 0.56
BEST1O76090 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.55■□□□□ 0.56
BEST1O76090 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.55■□□□□ 0.56
BEST1O76090 AC005104.2-201ENST00000427818 678 ntBASIC18.55■□□□□ 0.56
BEST1O76090 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.55■□□□□ 0.56
BEST1O76090 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.55■□□□□ 0.56
BEST1O76090 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BEST1O76090 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.55■□□□□ 0.56
BEST1O76090 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.55■□□□□ 0.56
BEST1O76090 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.55■□□□□ 0.56
BEST1O76090 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
BEST1O76090 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
BEST1O76090 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.54■□□□□ 0.56
BEST1O76090 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.54■□□□□ 0.56
BEST1O76090 LINC00304-203ENST00000565008 1864 ntBASIC18.54■□□□□ 0.56
BEST1O76090 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
BEST1O76090 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.54■□□□□ 0.56
BEST1O76090 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
BEST1O76090 AC148477.5-201ENST00000625164 1645 ntBASIC18.54■□□□□ 0.56
BEST1O76090 AC079776.2-201ENST00000641154 1609 ntBASIC18.54■□□□□ 0.56
BEST1O76090 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BEST1O76090 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.54■□□□□ 0.56
BEST1O76090 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.54■□□□□ 0.56
BEST1O76090 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.54■□□□□ 0.56
BEST1O76090 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.54■□□□□ 0.56
BEST1O76090 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.54■□□□□ 0.56
BEST1O76090 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.54■□□□□ 0.56
BEST1O76090 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 AL356309.3-201ENST00000624132 1934 ntBASIC18.54■□□□□ 0.56
BEST1O76090 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BEST1O76090 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BEST1O76090 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
BEST1O76090 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
BEST1O76090 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.54■□□□□ 0.56
BEST1O76090 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BEST1O76090 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 HNRNPDP1-201ENST00000439535 754 ntBASIC18.53■□□□□ 0.56
BEST1O76090 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
BEST1O76090 BX005266.1-201ENST00000473402 457 ntBASIC18.53■□□□□ 0.56
BEST1O76090 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
BEST1O76090 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.53■□□□□ 0.56
BEST1O76090 AC021087.4-201ENST00000563761 564 ntBASIC18.53■□□□□ 0.56
BEST1O76090 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.53■□□□□ 0.56
BEST1O76090 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.53■□□□□ 0.56
BEST1O76090 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.53■□□□□ 0.56
BEST1O76090 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.53■□□□□ 0.56
BEST1O76090 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
BEST1O76090 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms