Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 AC140113.2-201ENST00000604370 208 ntBASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
TRAV19A0A0A6YYK7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV19A0A0A6YYK7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV19A0A0A6YYK7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.27■□□□□ 0.51
TRAV19A0A0A6YYK7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV19A0A0A6YYK7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
TRAV19A0A0A6YYK7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV19A0A0A6YYK7 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV19A0A0A6YYK7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRAV19A0A0A6YYK7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
TRAV19A0A0A6YYK7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.27■□□□□ 0.51
TRAV19A0A0A6YYK7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 AC004408.2-201ENST00000623613 2777 ntBASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 AC136632.2-201ENST00000512891 861 ntBASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 FLJ13224-201ENST00000313737 1514 ntBASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TRAV19A0A0A6YYK7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 AC148477.5-201ENST00000625164 1645 ntBASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 BX842568.4-201ENST00000421222 227 ntBASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
TRAV19A0A0A6YYK7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 NCF1C-201ENST00000438382 1427 ntBASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV19A0A0A6YYK7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms