Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CNOT11Q9UKZ1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 ARMC10P1-201ENST00000313754 855 ntBASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 AL359075.1-203ENST00000462729 1002 ntBASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 SEC1P-202ENST00000473944 940 ntBASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 AC105020.1-201ENST00000435356 2205 ntBASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CNOT11Q9UKZ1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 KRT8P7-201ENST00000533003 1432 ntBASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 HOXB1-202ENST00000577092 1414 ntBASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 STARP1-201ENST00000397973 869 ntBASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 KRT18P23-201ENST00000435622 1283 ntBASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 OR6D1P-202ENST00000641007 5290 ntBASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 AC034236.2-201ENST00000606662 1610 ntBASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 CROCCP2-202ENST00000412962 2773 ntBASIC17.05■□□□□ 0.32
CNOT11Q9UKZ1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CNOT11Q9UKZ1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT11Q9UKZ1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT11Q9UKZ1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.04■□□□□ 0.32
CNOT11Q9UKZ1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT11Q9UKZ1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT11Q9UKZ1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT11Q9UKZ1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CNOT11Q9UKZ1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms