Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 ADH5P3-201ENST00000433842 1137 ntBASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 HLA-J-203ENST00000494367 1087 ntBASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC004449.1-201ENST00000564240 433 ntBASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC011467.4-201ENST00000594891 528 ntBASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
KRTAP4-1Q9BYQ7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 POR-209ENST00000439269 1858 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 DDT-204ENST00000404092 805 ntTSL 3 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 HLA-DRB6-201ENST00000411500 1235 ntBASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC023141.13-201ENST00000604991 943 ntBASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 ACTL9-202ENST00000612068 1252 ntBASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 PI4KAP1-204ENST00000612579 1703 ntBASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
KRTAP4-1Q9BYQ7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
KRTAP4-1Q9BYQ7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms