Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.87□□□□□ -0.03
CCL13Q99616 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL13Q99616 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL13Q99616 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CCL13Q99616 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL13Q99616 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.87□□□□□ -0.03
CCL13Q99616 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CCL13Q99616 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CCL13Q99616 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CCL13Q99616 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CCL13Q99616 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.87□□□□□ -0.03
CCL13Q99616 NSUN5P1-202ENST00000421140 1535 ntBASIC14.87□□□□□ -0.03
CCL13Q99616 NSUN5P2-203ENST00000457352 1529 ntBASIC14.87□□□□□ -0.03
CCL13Q99616 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL13Q99616 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL13Q99616 AC125634.1-201ENST00000438758 1403 ntBASIC14.86□□□□□ -0.03
CCL13Q99616 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCL13Q99616 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.86□□□□□ -0.03
CCL13Q99616 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CCL13Q99616 AC012615.1-201ENST00000565797 1299 ntBASIC14.86□□□□□ -0.03
CCL13Q99616 MIR3652-201ENST00000579335 131 ntBASIC14.86□□□□□ -0.03
CCL13Q99616 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL13Q99616 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL13Q99616 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 NOC2LP2-201ENST00000407594 1944 ntBASIC14.86□□□□□ -0.03
CCL13Q99616 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCL13Q99616 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCL13Q99616 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CCL13Q99616 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL13Q99616 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCL13Q99616 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL13Q99616 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.85□□□□□ -0.03
CCL13Q99616 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CCL13Q99616 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL13Q99616 IGHV3-47-201ENST00000425060 335 ntBASIC14.85□□□□□ -0.03
CCL13Q99616 KRT18P56-201ENST00000507275 550 ntBASIC14.85□□□□□ -0.03
CCL13Q99616 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.85□□□□□ -0.03
CCL13Q99616 AC099336.1-202ENST00000602961 463 ntBASIC14.85□□□□□ -0.03
CCL13Q99616 AL138831.2-201ENST00000606564 490 ntBASIC14.85□□□□□ -0.03
CCL13Q99616 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL13Q99616 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL13Q99616 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.85□□□□□ -0.03
CCL13Q99616 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.85□□□□□ -0.03
CCL13Q99616 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL13Q99616 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCL13Q99616 AC068880.1-201ENST00000507289 2297 ntBASIC14.85□□□□□ -0.03
CCL13Q99616 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL13Q99616 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms