Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RPGRIP1Q96KN7 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 MIR574-201ENST00000385209 96 ntBASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 AC099398.1-201ENST00000567919 2776 ntBASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.55■□□□□ 0.72
RPGRIP1Q96KN7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 AC090616.6-201ENST00000582640 721 ntBASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 AC141586.5-201ENST00000624546 2050 ntBASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RPGRIP1Q96KN7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 AC092865.5-201ENST00000545435 363 ntBASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RPGRIP1Q96KN7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms