Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
GCN1Q92616 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GCN1Q92616 IRX1P1-201ENST00000438849 1838 ntBASIC15.28■□□□□ 0.04
GCN1Q92616 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.28■□□□□ 0.04
GCN1Q92616 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.28■□□□□ 0.04
GCN1Q92616 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.28■□□□□ 0.04
GCN1Q92616 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.28■□□□□ 0.04
GCN1Q92616 AC105129.2-201ENST00000559536 390 ntBASIC15.28■□□□□ 0.04
GCN1Q92616 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.28■□□□□ 0.04
GCN1Q92616 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.28■□□□□ 0.04
GCN1Q92616 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.28■□□□□ 0.04
GCN1Q92616 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
GCN1Q92616 TMEM198B-204ENST00000484016 896 ntBASIC15.28■□□□□ 0.04
GCN1Q92616 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.28■□□□□ 0.04
GCN1Q92616 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.28■□□□□ 0.04
GCN1Q92616 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GCN1Q92616 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCN1Q92616 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
GCN1Q92616 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GCN1Q92616 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GCN1Q92616 AL023806.1-201ENST00000603994 1649 ntBASIC15.27■□□□□ 0.04
GCN1Q92616 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.27■□□□□ 0.04
GCN1Q92616 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCN1Q92616 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.27■□□□□ 0.04
GCN1Q92616 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.27■□□□□ 0.04
GCN1Q92616 NUS1P3-201ENST00000423502 862 ntBASIC15.27■□□□□ 0.04
GCN1Q92616 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.27■□□□□ 0.04
GCN1Q92616 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCN1Q92616 AL118558.3-201ENST00000607414 1079 ntBASIC15.27■□□□□ 0.04
GCN1Q92616 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
GCN1Q92616 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.27■□□□□ 0.04
GCN1Q92616 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GCN1Q92616 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC15.27■□□□□ 0.04
GCN1Q92616 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GCN1Q92616 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
GCN1Q92616 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
GCN1Q92616 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.27■□□□□ 0.03
GCN1Q92616 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.03
GCN1Q92616 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GCN1Q92616 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GCN1Q92616 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GCN1Q92616 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GCN1Q92616 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GCN1Q92616 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.27■□□□□ 0.03
GCN1Q92616 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.27■□□□□ 0.03
GCN1Q92616 GPAA1P2-201ENST00000417923 928 ntBASIC15.27■□□□□ 0.03
GCN1Q92616 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.27■□□□□ 0.03
GCN1Q92616 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GCN1Q92616 RNA5SP412-201ENST00000516234 123 ntBASIC15.27■□□□□ 0.03
GCN1Q92616 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.27■□□□□ 0.03
GCN1Q92616 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.27■□□□□ 0.03
GCN1Q92616 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.27■□□□□ 0.03
GCN1Q92616 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.27■□□□□ 0.03
GCN1Q92616 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.27■□□□□ 0.03
GCN1Q92616 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GCN1Q92616 AC093677.2-201ENST00000600169 1863 ntBASIC15.27■□□□□ 0.03
GCN1Q92616 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 KRT8P19-201ENST00000551916 1455 ntBASIC15.26■□□□□ 0.03
GCN1Q92616 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 AL512408.1-201ENST00000569378 2000 ntBASIC15.26■□□□□ 0.03
GCN1Q92616 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.26■□□□□ 0.03
GCN1Q92616 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.26■□□□□ 0.03
GCN1Q92616 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.26■□□□□ 0.03
GCN1Q92616 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 SLC7A15P-201ENST00000424028 1363 ntBASIC15.26■□□□□ 0.03
GCN1Q92616 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GCN1Q92616 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 PDIA3P1-201ENST00000471856 1510 ntBASIC15.26■□□□□ 0.03
GCN1Q92616 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GCN1Q92616 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GCN1Q92616 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GCN1Q92616 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
GCN1Q92616 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms