Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1BQ8WW43 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
APH1BQ8WW43 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
APH1BQ8WW43 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1BQ8WW43 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
APH1BQ8WW43 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
APH1BQ8WW43 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 KRT8P47-201ENST00000604727 1398 ntBASIC16.03■□□□□ 0.16
APH1BQ8WW43 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 PCDHB17P-201ENST00000539533 2393 ntBASIC16.03■□□□□ 0.16
APH1BQ8WW43 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 AC116562.2-201ENST00000507042 360 ntBASIC16.03■□□□□ 0.16
APH1BQ8WW43 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.03■□□□□ 0.16
APH1BQ8WW43 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.03■□□□□ 0.16
APH1BQ8WW43 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
APH1BQ8WW43 AC092171.3-201ENST00000610122 2651 ntBASIC16.02■□□□□ 0.16
APH1BQ8WW43 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.02■□□□□ 0.16
APH1BQ8WW43 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 AC078925.2-201ENST00000624013 1973 ntBASIC16.02■□□□□ 0.16
APH1BQ8WW43 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.02■□□□□ 0.16
APH1BQ8WW43 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
APH1BQ8WW43 AL355802.2-201ENST00000402069 882 ntBASIC16.02■□□□□ 0.16
APH1BQ8WW43 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.02■□□□□ 0.16
APH1BQ8WW43 AP003041.3-201ENST00000527151 707 ntBASIC16.02■□□□□ 0.16
APH1BQ8WW43 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.02■□□□□ 0.16
APH1BQ8WW43 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.02■□□□□ 0.16
APH1BQ8WW43 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.02■□□□□ 0.16
APH1BQ8WW43 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
APH1BQ8WW43 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.02■□□□□ 0.16
APH1BQ8WW43 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.02■□□□□ 0.16
APH1BQ8WW43 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
APH1BQ8WW43 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APH1BQ8WW43 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APH1BQ8WW43 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APH1BQ8WW43 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.02■□□□□ 0.15
APH1BQ8WW43 AC006449.5-201ENST00000610658 2098 ntBASIC16.02■□□□□ 0.15
APH1BQ8WW43 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
APH1BQ8WW43 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.02■□□□□ 0.15
APH1BQ8WW43 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APH1BQ8WW43 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.02■□□□□ 0.15
APH1BQ8WW43 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.02■□□□□ 0.15
APH1BQ8WW43 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
APH1BQ8WW43 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.02■□□□□ 0.15
APH1BQ8WW43 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.02■□□□□ 0.15
APH1BQ8WW43 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APH1BQ8WW43 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
APH1BQ8WW43 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.02■□□□□ 0.15
APH1BQ8WW43 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
APH1BQ8WW43 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APH1BQ8WW43 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
APH1BQ8WW43 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APH1BQ8WW43 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APH1BQ8WW43 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APH1BQ8WW43 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APH1BQ8WW43 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APH1BQ8WW43 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APH1BQ8WW43 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
APH1BQ8WW43 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
APH1BQ8WW43 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.01■□□□□ 0.15
APH1BQ8WW43 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.01■□□□□ 0.15
APH1BQ8WW43 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms