Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 CYP2T1P-202ENST00000641596 2535 ntBASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SMIM4Q8WVI0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 AC022188.1-201ENST00000620960 1664 ntBASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 KRT18P23-201ENST00000435622 1283 ntBASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 RPS2P4-201ENST00000476944 856 ntBASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SMIM4Q8WVI0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 KRASP1-201ENST00000407852 552 ntBASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 AC239809.2-201ENST00000415381 517 ntBASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 DDX43P3-201ENST00000441064 443 ntBASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 AP002982.1-201ENST00000492365 877 ntBASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 RARRES2P10-201ENST00000564312 460 ntBASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 AC022517.1-201ENST00000592429 346 ntBASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 AC069544.1-201ENST00000609399 999 ntBASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 MST1L-201ENST00000442552 2185 ntBASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 AL513477.1-201ENST00000602865 2407 ntBASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
SMIM4Q8WVI0 AC103702.1-201ENST00000548801 2630 ntBASIC15.15■□□□□ 0.02
SMIM4Q8WVI0 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms