Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SH3RF2Q8TEC5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 COX5BP2-201ENST00000392354 334 ntBASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 ZNF259P1-201ENST00000407656 1365 ntBASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 AC092910.1-201ENST00000482027 1129 ntBASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 AD001527.2-201ENST00000622994 785 ntBASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 AC079776.2-201ENST00000641154 1609 ntBASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SH3RF2Q8TEC5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 AC005332.8-201ENST00000622750 2735 ntBASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 MIR940-201ENST00000401276 94 ntBASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 POLD2P1-201ENST00000511220 997 ntBASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 AC008735.5-201ENST00000623544 497 ntBASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 AC107918.4-202ENST00000641623 219 ntBASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3RF2Q8TEC5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 AC103564.2-201ENST00000432853 1299 ntBASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 AC098831.1-202ENST00000438821 336 ntBASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 IGHV3-22-201ENST00000520721 359 ntBASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 GPALPP1-207ENST00000611650 899 ntBASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 AC117500.6-201ENST00000624871 588 ntBASIC18.34■□□□□ 0.53
SH3RF2Q8TEC5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms