Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NME8Q8N427 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.49■□□□□ 0.71
NME8Q8N427 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.49■□□□□ 0.71
NME8Q8N427 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
NME8Q8N427 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NME8Q8N427 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NME8Q8N427 WIZP1-201ENST00000531444 2299 ntBASIC19.49■□□□□ 0.71
NME8Q8N427 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NME8Q8N427 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.49■□□□□ 0.71
NME8Q8N427 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.49■□□□□ 0.71
NME8Q8N427 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NME8Q8N427 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NME8Q8N427 AL353593.2-201ENST00000602529 1483 ntBASIC19.48■□□□□ 0.71
NME8Q8N427 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.48■□□□□ 0.71
NME8Q8N427 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NME8Q8N427 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.48■□□□□ 0.71
NME8Q8N427 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NME8Q8N427 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.48■□□□□ 0.71
NME8Q8N427 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.48■□□□□ 0.71
NME8Q8N427 POLD2P1-201ENST00000511220 997 ntBASIC19.48■□□□□ 0.71
NME8Q8N427 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.48■□□□□ 0.71
NME8Q8N427 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.48■□□□□ 0.71
NME8Q8N427 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 AC073592.5-201ENST00000624854 528 ntBASIC19.48■□□□□ 0.71
NME8Q8N427 AC104109.2-201ENST00000602919 1418 ntBASIC19.48■□□□□ 0.71
NME8Q8N427 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.48■□□□□ 0.71
NME8Q8N427 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NME8Q8N427 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.48■□□□□ 0.71
NME8Q8N427 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.47■□□□□ 0.71
NME8Q8N427 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NME8Q8N427 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.47■□□□□ 0.71
NME8Q8N427 RNA5SP415-201ENST00000517246 115 ntBASIC19.47■□□□□ 0.71
NME8Q8N427 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.47■□□□□ 0.71
NME8Q8N427 AC027601.4-201ENST00000611259 610 ntBASIC19.47■□□□□ 0.71
NME8Q8N427 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
NME8Q8N427 FAM197Y3-203ENST00000618346 717 ntBASIC19.47■□□□□ 0.71
NME8Q8N427 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NME8Q8N427 AL049757.1-201ENST00000616842 1596 ntBASIC19.47■□□□□ 0.71
NME8Q8N427 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
NME8Q8N427 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.47■□□□□ 0.71
NME8Q8N427 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
NME8Q8N427 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NME8Q8N427 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
NME8Q8N427 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NME8Q8N427 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.46■□□□□ 0.71
NME8Q8N427 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 KRT18P13-201ENST00000400056 1290 ntBASIC19.46■□□□□ 0.71
NME8Q8N427 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.46■□□□□ 0.71
NME8Q8N427 AL020989.1-201ENST00000422979 469 ntBASIC19.46■□□□□ 0.71
NME8Q8N427 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.46■□□□□ 0.71
NME8Q8N427 AL591424.1-201ENST00000442569 1213 ntBASIC19.46■□□□□ 0.71
NME8Q8N427 AC034105.1-201ENST00000563488 319 ntBASIC19.46■□□□□ 0.71
NME8Q8N427 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.46■□□□□ 0.71
NME8Q8N427 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NME8Q8N427 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NME8Q8N427 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.46■□□□□ 0.71
NME8Q8N427 Z83851.2-201ENST00000609564 659 ntBASIC19.46■□□□□ 0.71
NME8Q8N427 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.46■□□□□ 0.71
NME8Q8N427 PGM5P2-202ENST00000637225 1043 ntBASIC19.46■□□□□ 0.71
NME8Q8N427 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
NME8Q8N427 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NME8Q8N427 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NME8Q8N427 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms