Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.82■□□□□ 0.92
RAB11FIP4Q86YS3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RAB11FIP4Q86YS3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 PP12613-201ENST00000424958 2230 ntBASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 REXO1L11P-201ENST00000620964 1927 ntBASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 ATP5G2P1-201ENST00000433580 426 ntBASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 DRAXINP1-201ENST00000437611 948 ntBASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 AC092329.2-201ENST00000598402 547 ntBASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB11FIP4Q86YS3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 HCG4P8-203ENST00000443049 980 ntBASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 AC074051.2-201ENST00000565115 352 ntBASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 AL353801.3-201ENST00000609898 542 ntBASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 AC012313.10-201ENST00000623509 926 ntBASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB11FIP4Q86YS3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 SLC25A6P5-201ENST00000435663 894 ntBASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB11FIP4Q86YS3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB11FIP4Q86YS3 KRT17P6-201ENST00000453795 1220 ntBASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms