Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PPP4R4Q6NUP7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 AL138688.1-201ENST00000624851 1594 ntBASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 KRT18P57-201ENST00000443599 1254 ntBASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 EGLN1P1-201ENST00000531623 762 ntBASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PPP4R4Q6NUP7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 AL137013.1-201ENST00000432946 1228 ntBASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.02■□□□□ 0.32
PPP4R4Q6NUP7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PPP4R4Q6NUP7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 INGX-201ENST00000359239 846 ntBASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PPP4R4Q6NUP7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms