Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 COX5BP2-201ENST00000392354 334 ntBASIC15.5■□□□□ 0.07
HIST1H3AP68431 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 AL845331.1-201ENST00000424978 1190 ntBASIC15.5■□□□□ 0.07
HIST1H3AP68431 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 FAM86EP-206ENST00000510506 987 ntBASIC15.5■□□□□ 0.07
HIST1H3AP68431 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 NTF6B-201ENST00000591913 560 ntBASIC15.5■□□□□ 0.07
HIST1H3AP68431 AL592071.1-201ENST00000611956 408 ntBASIC15.5■□□□□ 0.07
HIST1H3AP68431 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HIST1H3AP68431 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.5■□□□□ 0.07
HIST1H3AP68431 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 AC005332.1-201ENST00000577698 1310 ntBASIC15.49■□□□□ 0.07
HIST1H3AP68431 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.49■□□□□ 0.07
HIST1H3AP68431 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.49■□□□□ 0.07
HIST1H3AP68431 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HIST1H3AP68431 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HIST1H3AP68431 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 AC116407.4-201ENST00000623319 1061 ntBASIC15.48■□□□□ 0.07
HIST1H3AP68431 AC124864.1-201ENST00000623408 392 ntBASIC15.48■□□□□ 0.07
HIST1H3AP68431 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 AC125634.1-201ENST00000438758 1403 ntBASIC15.48■□□□□ 0.07
HIST1H3AP68431 AC010460.3-201ENST00000511359 1579 ntBASIC15.48■□□□□ 0.07
HIST1H3AP68431 AC139713.2-201ENST00000641328 2723 ntBASIC15.48■□□□□ 0.07
HIST1H3AP68431 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.48■□□□□ 0.07
HIST1H3AP68431 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HIST1H3AP68431 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HIST1H3AP68431 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HIST1H3AP68431 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms