Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.3■□□□□ 0.84
GTF2A2P52657 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.29■□□□□ 0.84
GTF2A2P52657 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GTF2A2P52657 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.29■□□□□ 0.84
GTF2A2P52657 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
GTF2A2P52657 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
GTF2A2P52657 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
GTF2A2P52657 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.29■□□□□ 0.84
GTF2A2P52657 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC20.29■□□□□ 0.84
GTF2A2P52657 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GTF2A2P52657 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
GTF2A2P52657 MIR4745-201ENST00000577608 62 ntBASIC20.29■□□□□ 0.84
GTF2A2P52657 AC138761.1-201ENST00000584393 385 ntBASIC20.29■□□□□ 0.84
GTF2A2P52657 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.29■□□□□ 0.84
GTF2A2P52657 AC005498.2-205ENST00000593218 784 ntBASIC20.29■□□□□ 0.84
GTF2A2P52657 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 AC116407.2-201ENST00000613639 860 ntBASIC20.29■□□□□ 0.84
GTF2A2P52657 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.29■□□□□ 0.84
GTF2A2P52657 PI4KAP1-204ENST00000612579 1703 ntBASIC20.29■□□□□ 0.84
GTF2A2P52657 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.29■□□□□ 0.84
GTF2A2P52657 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GTF2A2P52657 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
GTF2A2P52657 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF2A2P52657 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.28■□□□□ 0.84
GTF2A2P52657 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF2A2P52657 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 FAM86GP-201ENST00000448322 971 ntBASIC20.28■□□□□ 0.84
GTF2A2P52657 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF2A2P52657 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.28■□□□□ 0.84
GTF2A2P52657 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF2A2P52657 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF2A2P52657 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.28■□□□□ 0.84
GTF2A2P52657 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.28■□□□□ 0.84
GTF2A2P52657 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.28■□□□□ 0.84
GTF2A2P52657 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GTF2A2P52657 BX276092.7-203ENST00000637198 1536 ntBASIC20.27■□□□□ 0.84
GTF2A2P52657 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
GTF2A2P52657 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 AC126763.1-201ENST00000552015 2118 ntBASIC20.27■□□□□ 0.84
GTF2A2P52657 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.27■□□□□ 0.84
GTF2A2P52657 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.27■□□□□ 0.84
GTF2A2P52657 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
GTF2A2P52657 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.27■□□□□ 0.84
GTF2A2P52657 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.27■□□□□ 0.84
GTF2A2P52657 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.27■□□□□ 0.84
GTF2A2P52657 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
GTF2A2P52657 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
GTF2A2P52657 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
GTF2A2P52657 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.27■□□□□ 0.84
GTF2A2P52657 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
GTF2A2P52657 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
GTF2A2P52657 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.26■□□□□ 0.83
GTF2A2P52657 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.26■□□□□ 0.83
GTF2A2P52657 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A2P52657 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A2P52657 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A2P52657 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A2P52657 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A2P52657 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A2P52657 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.26■□□□□ 0.83
GTF2A2P52657 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.26■□□□□ 0.83
GTF2A2P52657 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.26■□□□□ 0.83
GTF2A2P52657 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
GTF2A2P52657 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A2P52657 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
GTF2A2P52657 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GTF2A2P52657 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms