Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A6P48664 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A6P48664 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SLC1A6P48664 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A6P48664 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A6P48664 AC024243.1-201ENST00000609234 778 ntBASIC17.45■□□□□ 0.38
SLC1A6P48664 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A6P48664 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A6P48664 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A6P48664 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC1A6P48664 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC1A6P48664 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
SLC1A6P48664 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC1A6P48664 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A6P48664 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC1A6P48664 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC1A6P48664 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SLC1A6P48664 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SLC1A6P48664 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC1A6P48664 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC1A6P48664 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.44■□□□□ 0.38
SLC1A6P48664 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SLC1A6P48664 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC1A6P48664 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SLC1A6P48664 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.44■□□□□ 0.38
SLC1A6P48664 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SLC1A6P48664 UNC93B2-201ENST00000285383 730 ntBASIC17.44■□□□□ 0.38
SLC1A6P48664 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SLC1A6P48664 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 AP003071.4-201ENST00000562276 1284 ntBASIC17.44■□□□□ 0.38
SLC1A6P48664 ITM2C-210ENST00000620962 501 ntBASIC17.44■□□□□ 0.38
SLC1A6P48664 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC1A6P48664 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC1A6P48664 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SLC1A6P48664 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SLC1A6P48664 PCDHA14-201ENST00000506751 2298 ntBASIC17.44■□□□□ 0.38
SLC1A6P48664 AC060834.1-201ENST00000443027 2032 ntBASIC17.43■□□□□ 0.38
SLC1A6P48664 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLC1A6P48664 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SLC1A6P48664 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC1A6P48664 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SLC1A6P48664 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 AC105020.1-201ENST00000435356 2205 ntBASIC17.43■□□□□ 0.38
SLC1A6P48664 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLC1A6P48664 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC1A6P48664 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 RBM17P1-201ENST00000453646 1190 ntBASIC17.43■□□□□ 0.38
SLC1A6P48664 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.43■□□□□ 0.38
SLC1A6P48664 FAM201B-201ENST00000458407 597 ntBASIC17.43■□□□□ 0.38
SLC1A6P48664 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SLC1A6P48664 AC142381.4-202ENST00000563973 229 ntBASIC17.43■□□□□ 0.38
SLC1A6P48664 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
SLC1A6P48664 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC1A6P48664 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 AC016396.2-201ENST00000562575 1417 ntBASIC17.43■□□□□ 0.38
SLC1A6P48664 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLC1A6P48664 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SLC1A6P48664 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC1A6P48664 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC1A6P48664 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A6P48664 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
SLC1A6P48664 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
SLC1A6P48664 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC1A6P48664 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
SLC1A6P48664 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC1A6P48664 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SLC1A6P48664 PCDHB19P-201ENST00000570871 2371 ntBASIC17.42■□□□□ 0.38
SLC1A6P48664 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A6P48664 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLC1A6P48664 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC1A6P48664 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC1A6P48664 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC1A6P48664 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.42■□□□□ 0.38
SLC1A6P48664 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC1A6P48664 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms