Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.84■□□□□ 0.29
RORAP35398 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.84■□□□□ 0.29
RORAP35398 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.84■□□□□ 0.29
RORAP35398 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.84■□□□□ 0.29
RORAP35398 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.84■□□□□ 0.29
RORAP35398 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.84■□□□□ 0.29
RORAP35398 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.84■□□□□ 0.29
RORAP35398 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RORAP35398 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 ABALON-201ENST00000629058 1903 ntBASIC16.84■□□□□ 0.29
RORAP35398 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
RORAP35398 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RORAP35398 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.84■□□□□ 0.29
RORAP35398 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RORAP35398 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.83■□□□□ 0.29
RORAP35398 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.83■□□□□ 0.29
RORAP35398 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RORAP35398 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RORAP35398 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RORAP35398 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RORAP35398 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RORAP35398 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RORAP35398 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.83■□□□□ 0.28
RORAP35398 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RORAP35398 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RORAP35398 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RORAP35398 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.83■□□□□ 0.28
RORAP35398 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RORAP35398 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RORAP35398 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RORAP35398 IL9RP2-201ENST00000423948 1312 ntBASIC16.83■□□□□ 0.28
RORAP35398 HNRNPDP1-201ENST00000439535 754 ntBASIC16.83■□□□□ 0.28
RORAP35398 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.83■□□□□ 0.28
RORAP35398 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.83■□□□□ 0.28
RORAP35398 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RORAP35398 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.83■□□□□ 0.28
RORAP35398 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.83■□□□□ 0.28
RORAP35398 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.83■□□□□ 0.28
RORAP35398 SART3-203ENST00000546611 1184 ntBASIC16.83■□□□□ 0.28
RORAP35398 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.83■□□□□ 0.28
RORAP35398 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RORAP35398 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.83■□□□□ 0.28
RORAP35398 MIR7706-201ENST00000613747 67 ntBASIC16.83■□□□□ 0.28
RORAP35398 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.83■□□□□ 0.28
RORAP35398 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RORAP35398 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RORAP35398 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.82■□□□□ 0.28
RORAP35398 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RORAP35398 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 AC135050.7-201ENST00000624508 2218 ntBASIC16.82■□□□□ 0.28
RORAP35398 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RORAP35398 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.82■□□□□ 0.28
RORAP35398 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RORAP35398 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.82■□□□□ 0.28
RORAP35398 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RORAP35398 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.82■□□□□ 0.28
RORAP35398 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 AC022898.2-201ENST00000616822 1312 ntBASIC16.82■□□□□ 0.28
RORAP35398 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RORAP35398 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.82■□□□□ 0.28
RORAP35398 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.82■□□□□ 0.28
RORAP35398 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.82■□□□□ 0.28
RORAP35398 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.82■□□□□ 0.28
RORAP35398 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.82■□□□□ 0.28
RORAP35398 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.82■□□□□ 0.28
RORAP35398 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.82■□□□□ 0.28
RORAP35398 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RORAP35398 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.82■□□□□ 0.28
RORAP35398 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RORAP35398 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.82■□□□□ 0.28
RORAP35398 FAM215A-202ENST00000632077 792 ntBASIC16.82■□□□□ 0.28
RORAP35398 AP000867.4-201ENST00000641616 219 ntBASIC16.82■□□□□ 0.28
RORAP35398 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RORAP35398 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RORAP35398 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.82■□□□□ 0.28
RORAP35398 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RORAP35398 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RORAP35398 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms