Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NR4A1P22736 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR4A1P22736 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.53■□□□□ 0.24
NR4A1P22736 PCDHA14-201ENST00000506751 2298 ntBASIC16.53■□□□□ 0.24
NR4A1P22736 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NR4A1P22736 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NR4A1P22736 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NR4A1P22736 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.53■□□□□ 0.24
NR4A1P22736 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.53■□□□□ 0.24
NR4A1P22736 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NR4A1P22736 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NR4A1P22736 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NR4A1P22736 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NR4A1P22736 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NR4A1P22736 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NR4A1P22736 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 TSPY21P-201ENST00000433481 731 ntBASIC16.52■□□□□ 0.24
NR4A1P22736 MFAP1P1-201ENST00000442257 1255 ntBASIC16.52■□□□□ 0.24
NR4A1P22736 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.52■□□□□ 0.24
NR4A1P22736 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.52■□□□□ 0.24
NR4A1P22736 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.52■□□□□ 0.24
NR4A1P22736 MYC-208ENST00000641036 567 ntBASIC16.52■□□□□ 0.24
NR4A1P22736 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.52■□□□□ 0.24
NR4A1P22736 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.52■□□□□ 0.24
NR4A1P22736 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NR4A1P22736 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
NR4A1P22736 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NR4A1P22736 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NR4A1P22736 AC112777.1-201ENST00000540175 1423 ntBASIC16.52■□□□□ 0.23
NR4A1P22736 KRT8P9-201ENST00000558927 1449 ntBASIC16.52■□□□□ 0.23
NR4A1P22736 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
NR4A1P22736 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NR4A1P22736 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NR4A1P22736 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.52■□□□□ 0.23
NR4A1P22736 AL121761.2-201ENST00000598007 1648 ntBASIC16.52■□□□□ 0.23
NR4A1P22736 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
NR4A1P22736 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
NR4A1P22736 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
NR4A1P22736 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NR4A1P22736 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.52■□□□□ 0.23
NR4A1P22736 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
NR4A1P22736 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NR4A1P22736 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NR4A1P22736 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.51■□□□□ 0.23
NR4A1P22736 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
NR4A1P22736 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.51■□□□□ 0.23
NR4A1P22736 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A1P22736 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.51■□□□□ 0.23
NR4A1P22736 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.51■□□□□ 0.23
NR4A1P22736 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.51■□□□□ 0.23
NR4A1P22736 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A1P22736 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A1P22736 PRSS44-201ENST00000515154 1146 ntBASIC16.51■□□□□ 0.23
NR4A1P22736 NAPSB-206ENST00000562112 1266 ntBASIC16.51■□□□□ 0.23
NR4A1P22736 C2orf69P3-201ENST00000565542 1120 ntBASIC16.51■□□□□ 0.23
NR4A1P22736 LINC01023-201ENST00000606054 436 ntBASIC16.51■□□□□ 0.23
NR4A1P22736 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 AC133561.5-201ENST00000635547 218 ntBASIC16.51■□□□□ 0.23
NR4A1P22736 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 AC105020.1-201ENST00000435356 2205 ntBASIC16.51■□□□□ 0.23
NR4A1P22736 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.51■□□□□ 0.23
NR4A1P22736 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NR4A1P22736 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NR4A1P22736 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NR4A1P22736 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NR4A1P22736 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.51■□□□□ 0.23
NR4A1P22736 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR4A1P22736 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A1P22736 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NR4A1P22736 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A1P22736 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A1P22736 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
NR4A1P22736 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A1P22736 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
NR4A1P22736 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A1P22736 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.5■□□□□ 0.23
NR4A1P22736 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.5■□□□□ 0.23
NR4A1P22736 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR4A1P22736 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms