Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 AP003733.1-201ENST00000491725 852 ntBASIC16.45■□□□□ 0.22
PRKCAP17252 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.45■□□□□ 0.22
PRKCAP17252 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.45■□□□□ 0.22
PRKCAP17252 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PRKCAP17252 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PRKCAP17252 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
PRKCAP17252 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PRKCAP17252 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PRKCAP17252 AC080080.1-201ENST00000625121 2420 ntBASIC16.45■□□□□ 0.22
PRKCAP17252 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PRKCAP17252 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.45■□□□□ 0.22
PRKCAP17252 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PRKCAP17252 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PRKCAP17252 LINC00167-201ENST00000530583 1419 ntBASIC16.45■□□□□ 0.22
PRKCAP17252 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PRKCAP17252 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRKCAP17252 AC132938.6-201ENST00000623828 1655 ntBASIC16.44■□□□□ 0.22
PRKCAP17252 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.44■□□□□ 0.22
PRKCAP17252 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.44■□□□□ 0.22
PRKCAP17252 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
PRKCAP17252 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
PRKCAP17252 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.44■□□□□ 0.22
PRKCAP17252 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.44■□□□□ 0.22
PRKCAP17252 AL136038.3-201ENST00000561909 1096 ntBASIC16.44■□□□□ 0.22
PRKCAP17252 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.44■□□□□ 0.22
PRKCAP17252 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.44■□□□□ 0.22
PRKCAP17252 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.44■□□□□ 0.22
PRKCAP17252 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.44■□□□□ 0.22
PRKCAP17252 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.44■□□□□ 0.22
PRKCAP17252 AL121956.5-201ENST00000625261 221 ntBASIC16.44■□□□□ 0.22
PRKCAP17252 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.44■□□□□ 0.22
PRKCAP17252 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.44■□□□□ 0.22
PRKCAP17252 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PRKCAP17252 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PRKCAP17252 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PRKCAP17252 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.44■□□□□ 0.22
PRKCAP17252 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.43■□□□□ 0.22
PRKCAP17252 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
PRKCAP17252 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 LINC00602-201ENST00000629776 2065 ntBASIC16.43■□□□□ 0.22
PRKCAP17252 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PRKCAP17252 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 IGHGP-201ENST00000390555 1178 ntBASIC16.43■□□□□ 0.22
PRKCAP17252 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.43■□□□□ 0.22
PRKCAP17252 AL645929.1-201ENST00000420084 975 ntBASIC16.43■□□□□ 0.22
PRKCAP17252 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.43■□□□□ 0.22
PRKCAP17252 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.43■□□□□ 0.22
PRKCAP17252 AC087388.1-201ENST00000571370 1112 ntBASIC16.43■□□□□ 0.22
PRKCAP17252 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
PRKCAP17252 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.43■□□□□ 0.22
PRKCAP17252 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PRKCAP17252 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.43■□□□□ 0.22
PRKCAP17252 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PRKCAP17252 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms