Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.73■□□□□ 0.11
SGCEO43556 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC15.73■□□□□ 0.11
SGCEO43556 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.73■□□□□ 0.11
SGCEO43556 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.73■□□□□ 0.11
SGCEO43556 LY6E-213ENST00000522528 606 ntTSL 3 BASIC15.73■□□□□ 0.11
SGCEO43556 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.73■□□□□ 0.11
SGCEO43556 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.73■□□□□ 0.11
SGCEO43556 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.73■□□□□ 0.11
SGCEO43556 HYMAI.1-201ENST00000620949 238 ntBASIC15.73■□□□□ 0.11
SGCEO43556 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SGCEO43556 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
SGCEO43556 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.73■□□□□ 0.11
SGCEO43556 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.73■□□□□ 0.11
SGCEO43556 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SGCEO43556 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.73■□□□□ 0.11
SGCEO43556 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.73■□□□□ 0.11
SGCEO43556 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SGCEO43556 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.72■□□□□ 0.11
SGCEO43556 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.72■□□□□ 0.11
SGCEO43556 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.72■□□□□ 0.11
SGCEO43556 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 IGHGP-201ENST00000390555 1178 ntBASIC15.72■□□□□ 0.11
SGCEO43556 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.72■□□□□ 0.11
SGCEO43556 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 TSPY12P-201ENST00000421279 868 ntBASIC15.72■□□□□ 0.11
SGCEO43556 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.72■□□□□ 0.11
SGCEO43556 AL671277.2-201ENST00000458060 996 ntBASIC15.72■□□□□ 0.11
SGCEO43556 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.72■□□□□ 0.11
SGCEO43556 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.72■□□□□ 0.11
SGCEO43556 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.72■□□□□ 0.11
SGCEO43556 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.72■□□□□ 0.11
SGCEO43556 VENTXP5-201ENST00000523979 775 ntBASIC15.72■□□□□ 0.11
SGCEO43556 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.72■□□□□ 0.11
SGCEO43556 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.72■□□□□ 0.11
SGCEO43556 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.72■□□□□ 0.11
SGCEO43556 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.72■□□□□ 0.11
SGCEO43556 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SGCEO43556 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SGCEO43556 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SGCEO43556 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.72■□□□□ 0.11
SGCEO43556 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.71■□□□□ 0.11
SGCEO43556 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SGCEO43556 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SGCEO43556 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SGCEO43556 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SGCEO43556 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SGCEO43556 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.71■□□□□ 0.11
SGCEO43556 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.71■□□□□ 0.11
SGCEO43556 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.71■□□□□ 0.11
SGCEO43556 GPR32P1-201ENST00000601788 811 ntBASIC15.71■□□□□ 0.11
SGCEO43556 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.71■□□□□ 0.11
SGCEO43556 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.71■□□□□ 0.11
SGCEO43556 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms