Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 AC068472.1-201ENST00000474589 881 ntBASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 AP003733.1-201ENST00000491725 852 ntBASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 VENTXP5-201ENST00000523979 775 ntBASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 HYMAI.1-201ENST00000620949 238 ntBASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 AL353692.3-201ENST00000407031 1396 ntBASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TCRBV7S3A2A0A539 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 HBZP1-201ENST00000354915 429 ntBASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 AC006011.2-201ENST00000621313 1158 ntBASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 AC073912.3-201ENST00000624414 853 ntBASIC18.02■□□□□ 0.48
TCRBV7S3A2A0A539 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
TCRBV7S3A2A0A539 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TCRBV7S3A2A0A539 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 FAM8A6P-201ENST00000407496 1135 ntBASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 MTCL1P1-201ENST00000446207 792 ntBASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 AL359075.1-203ENST00000462729 1002 ntBASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 ZNF444P1-201ENST00000559497 298 ntBASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 AC090340.1-201ENST00000620778 4980 ntBASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TCRBV7S3A2A0A539 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 BX276092.7-203ENST00000637198 1536 ntBASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
TCRBV7S3A2A0A539 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms