Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 KRT18P31-201ENST00000506277 1292 ntBASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 AC005336.2-201ENST00000593183 939 ntBASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.11■□□□□ 0.65
GTF3C4Q9UKN8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 RN7SL510P-201ENST00000581311 263 ntBASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GTF3C4Q9UKN8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 AC112698.1-201ENST00000510299 916 ntBASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 AC111152.3-201ENST00000569699 673 ntBASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 IFNL4P1-201ENST00000607083 540 ntBASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 AL691432.3-201ENST00000621860 400 ntBASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.09■□□□□ 0.65
GTF3C4Q9UKN8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
GTF3C4Q9UKN8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GTF3C4Q9UKN8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
GTF3C4Q9UKN8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
GTF3C4Q9UKN8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GTF3C4Q9UKN8 AC100803.2-201ENST00000562459 1963 ntBASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms