Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AC211486.1-202ENST00000416371 468 ntBASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 MCCD1P2-201ENST00000423228 335 ntBASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 VN2R19P-201ENST00000442399 1052 ntBASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AC211476.1-201ENST00000503899 468 ntBASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AL596442.2-201ENST00000610240 980 ntBASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AL513190.1-201ENST00000621254 727 ntBASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 REXO1L9P-201ENST00000604264 2108 ntBASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HCFC1R1Q9NWW0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 IGHV3-65-201ENST00000523210 341 ntBASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 AL355385.1-201ENST00000606123 409 ntBASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 AC008667.4-201ENST00000607370 168 ntBASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HCFC1R1Q9NWW0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
HCFC1R1Q9NWW0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.33■□□□□ 0.53
HCFC1R1Q9NWW0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC1R1Q9NWW0 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HCFC1R1Q9NWW0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 HCG4B-203ENST00000450128 991 ntBASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 STK19B-204ENST00000512515 211 ntBASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 AC005829.1-201ENST00000570002 483 ntBASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 STK25P1-201ENST00000585406 838 ntBASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 AP000997.3-201ENST00000623333 2250 ntBASIC18.33■□□□□ 0.52
HCFC1R1Q9NWW0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 AC093503.3-201ENST00000624917 2352 ntBASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
HCFC1R1Q9NWW0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms