Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 MCCD1P1-208ENST00000445732 328 ntBASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 AC026366.1-201ENST00000488803 879 ntBASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 AL353708.3-201ENST00000610272 989 ntBASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 AC110285.5-201ENST00000611501 352 ntBASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 ABBA01031674.1-201ENST00000635145 728 ntBASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 KRT16P1-201ENST00000399124 1418 ntBASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC11.93□□□□□ -0.5
SND1-IT1Q9HBX3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 LTF-203ENST00000426532 2494 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 AC026271.3-201ENST00000571884 352 ntBASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 AC124016.1-201ENST00000609552 612 ntBASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 AL031985.4-201ENST00000642138 673 ntBASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SND1-IT1Q9HBX3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms