Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 BX842568.4-201ENST00000421222 227 ntBASIC18.47■□□□□ 0.55
LRRC3Q9BY71 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 AL591424.1-201ENST00000442569 1213 ntBASIC18.47■□□□□ 0.55
LRRC3Q9BY71 AC009947.1-201ENST00000444350 727 ntBASIC18.47■□□□□ 0.55
LRRC3Q9BY71 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.47■□□□□ 0.55
LRRC3Q9BY71 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 AC135776.1-201ENST00000319817 2481 ntBASIC18.47■□□□□ 0.55
LRRC3Q9BY71 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LRRC3Q9BY71 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 MED15P5-201ENST00000423150 992 ntBASIC18.46■□□□□ 0.55
LRRC3Q9BY71 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 AC019129.2-201ENST00000609837 1235 ntBASIC18.46■□□□□ 0.55
LRRC3Q9BY71 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 AC100803.2-201ENST00000562459 1963 ntBASIC18.46■□□□□ 0.55
LRRC3Q9BY71 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.46■□□□□ 0.55
LRRC3Q9BY71 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LRRC3Q9BY71 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.46■□□□□ 0.54
LRRC3Q9BY71 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LRRC3Q9BY71 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
LRRC3Q9BY71 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
LRRC3Q9BY71 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 KRT18P3-201ENST00000451602 1288 ntBASIC18.45■□□□□ 0.54
LRRC3Q9BY71 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 AL139424.1-201ENST00000607572 797 ntBASIC18.45■□□□□ 0.54
LRRC3Q9BY71 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LRRC3Q9BY71 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms