Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
CDCA3Q99618 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDCA3Q99618 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDCA3Q99618 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CDCA3Q99618 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.35■□□□□ 0.53
CDCA3Q99618 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.35■□□□□ 0.53
CDCA3Q99618 ACTG1P4-201ENST00000425123 1122 ntBASIC18.35■□□□□ 0.53
CDCA3Q99618 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.35■□□□□ 0.53
CDCA3Q99618 AC112191.1-201ENST00000523689 701 ntBASIC18.35■□□□□ 0.53
CDCA3Q99618 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 AC015911.4-201ENST00000588022 1070 ntBASIC18.35■□□□□ 0.53
CDCA3Q99618 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.35■□□□□ 0.53
CDCA3Q99618 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDCA3Q99618 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDCA3Q99618 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDCA3Q99618 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 AC244107.1-201ENST00000442033 332 ntBASIC18.34■□□□□ 0.53
CDCA3Q99618 FAM86GP-201ENST00000448322 971 ntBASIC18.34■□□□□ 0.53
CDCA3Q99618 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.34■□□□□ 0.53
CDCA3Q99618 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.34■□□□□ 0.53
CDCA3Q99618 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.34■□□□□ 0.53
CDCA3Q99618 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.34■□□□□ 0.53
CDCA3Q99618 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDCA3Q99618 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.34■□□□□ 0.53
CDCA3Q99618 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDCA3Q99618 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.34■□□□□ 0.53
CDCA3Q99618 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.34■□□□□ 0.53
CDCA3Q99618 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDCA3Q99618 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDCA3Q99618 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDCA3Q99618 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDCA3Q99618 AC073592.3-201ENST00000625118 1834 ntBASIC18.33■□□□□ 0.53
CDCA3Q99618 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.33■□□□□ 0.53
CDCA3Q99618 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.33■□□□□ 0.52
CDCA3Q99618 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.33■□□□□ 0.52
CDCA3Q99618 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDCA3Q99618 FAM185BP-201ENST00000443595 716 ntBASIC18.33■□□□□ 0.52
CDCA3Q99618 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.33■□□□□ 0.52
CDCA3Q99618 AC067863.1-201ENST00000494933 530 ntBASIC18.33■□□□□ 0.52
CDCA3Q99618 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDCA3Q99618 AC126763.1-201ENST00000552015 2118 ntBASIC18.33■□□□□ 0.52
CDCA3Q99618 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.33■□□□□ 0.52
CDCA3Q99618 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDCA3Q99618 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDCA3Q99618 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.33■□□□□ 0.52
CDCA3Q99618 LINC00628-201ENST00000628516 1289 ntBASIC18.33■□□□□ 0.52
CDCA3Q99618 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDCA3Q99618 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.33■□□□□ 0.52
CDCA3Q99618 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDCA3Q99618 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDCA3Q99618 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDCA3Q99618 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.33■□□□□ 0.52
CDCA3Q99618 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDCA3Q99618 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.33■□□□□ 0.52
CDCA3Q99618 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDCA3Q99618 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDCA3Q99618 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 AL031598.1-201ENST00000561511 1773 ntBASIC18.32■□□□□ 0.52
CDCA3Q99618 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDCA3Q99618 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDCA3Q99618 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDCA3Q99618 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.32■□□□□ 0.52
CDCA3Q99618 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.32■□□□□ 0.52
CDCA3Q99618 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.32■□□□□ 0.52
CDCA3Q99618 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDCA3Q99618 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.32■□□□□ 0.52
CDCA3Q99618 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA3Q99618 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA3Q99618 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDCA3Q99618 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms