Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 RN7SL471P-201ENST00000580476 299 ntBASIC13.59□□□□□ -0.23
LINC00479Q96M42 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 ASL-204ENST00000395331 1538 ntTSL 5 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00479Q96M42 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LINC00479Q96M42 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 HOXB1-202ENST00000577092 1414 ntBASIC13.58□□□□□ -0.24
LINC00479Q96M42 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 AL353807.1-201ENST00000427475 662 ntBASIC13.58□□□□□ -0.24
LINC00479Q96M42 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 REXO1L11P-201ENST00000620964 1927 ntBASIC13.58□□□□□ -0.24
LINC00479Q96M42 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00479Q96M42 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
LINC00479Q96M42 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 FSCN1P1-201ENST00000568912 1481 ntBASIC13.57□□□□□ -0.24
LINC00479Q96M42 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 MFAP1P1-201ENST00000442257 1255 ntBASIC13.57□□□□□ -0.24
LINC00479Q96M42 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 AC090192.1-201ENST00000517740 490 ntBASIC13.57□□□□□ -0.24
LINC00479Q96M42 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 SLC25A1P4-201ENST00000567977 778 ntBASIC13.57□□□□□ -0.24
LINC00479Q96M42 AF186192.3-201ENST00000583427 947 ntBASIC13.57□□□□□ -0.24
LINC00479Q96M42 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00479Q96M42 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00479Q96M42 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms