Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIPA1Q96FS4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SIPA1Q96FS4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 AC005593.1-201ENST00000624894 515 ntBASIC17.76■□□□□ 0.43
SIPA1Q96FS4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SIPA1Q96FS4 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 LETM1P2-201ENST00000597330 2178 ntBASIC17.75■□□□□ 0.43
SIPA1Q96FS4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 AL020989.1-201ENST00000422979 469 ntBASIC17.75■□□□□ 0.43
SIPA1Q96FS4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.75■□□□□ 0.43
SIPA1Q96FS4 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 PGM5P2-202ENST00000637225 1043 ntBASIC17.75■□□□□ 0.43
SIPA1Q96FS4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIPA1Q96FS4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 AP000974.1-201ENST00000623909 2387 ntBASIC17.74■□□□□ 0.43
SIPA1Q96FS4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 KRT18P27-201ENST00000427733 1299 ntBASIC17.74■□□□□ 0.43
SIPA1Q96FS4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 RNA5SP416-201ENST00000516838 111 ntBASIC17.74■□□□□ 0.43
SIPA1Q96FS4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIPA1Q96FS4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIPA1Q96FS4 WIZP1-201ENST00000531444 2299 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms