Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 AL031284.1-201ENST00000419297 478 ntBASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 AC093909.1-201ENST00000504731 1122 ntBASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
DEPDC1BQ8WUY9 AC068880.1-201ENST00000507289 2297 ntBASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 IL9RP2-201ENST00000423948 1312 ntBASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 AL671883.3-201ENST00000603274 991 ntBASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 AC008608.2-201ENST00000606089 416 ntBASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 PCDHB18P-201ENST00000524813 2368 ntBASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.81■□□□□ 0.6
DEPDC1BQ8WUY9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 AF228730.7-201ENST00000641842 219 ntBASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
DEPDC1BQ8WUY9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DEPDC1BQ8WUY9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms