Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 SLC4A1APP2-201ENST00000424054 1259 ntBASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 AC064836.3-201ENST00000607928 673 ntBASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH3TC1Q8TE82 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 PMP22-202ENST00000395936 816 ntTSL 3 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 ARTN-206ENST00000472435 402 ntTSL 3 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 AL691403.2-201ENST00000618460 490 ntBASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.03■■□□□ 1.12
SH3TC1Q8TE82 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 AC009949.1-201ENST00000623048 1830 ntBASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 AC006504.4-201ENST00000592118 1568 ntBASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 AC004832.2-201ENST00000426397 482 ntBASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 DDX43P3-201ENST00000441064 443 ntBASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 FIS1-203ENST00000442303 631 ntTSL 3 BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 SIGLEC30P-201ENST00000455569 941 ntBASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 AC109462.3-201ENST00000573934 613 ntBASIC22.02■■□□□ 1.12
SH3TC1Q8TE82 NCF1C-201ENST00000438382 1427 ntBASIC22.02■■□□□ 1.11
SH3TC1Q8TE82 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 BX276092.7-203ENST00000637198 1536 ntBASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 DNAJB3-201ENST00000446806 729 ntBASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 AC002347.1-201ENST00000569543 541 ntBASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.01■■□□□ 1.11
SH3TC1Q8TE82 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC22■■□□□ 1.11
SH3TC1Q8TE82 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms