Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC133963.1-201ENST00000504166 1679 ntBASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 CROCCP2-202ENST00000412962 2773 ntBASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 AL023806.1-201ENST00000603994 1649 ntBASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 AC009053.2-201ENST00000563701 2365 ntBASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 LIN28AP1-201ENST00000429574 405 ntBASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 ATP5G1P1-201ENST00000448724 379 ntBASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 AL391807.1-203ENST00000604392 2365 ntBASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CLHC1Q8NHS4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 LINC00304-203ENST00000565008 1864 ntBASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 SPDYE15P-201ENST00000424157 909 ntBASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 AL136038.4-201ENST00000603606 1261 ntBASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 AC099398.1-201ENST00000567919 2776 ntBASIC17.06■□□□□ 0.32
CLHC1Q8NHS4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 KRT8P47-201ENST00000604727 1398 ntBASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 AC133561.5-201ENST00000635547 218 ntBASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CLHC1Q8NHS4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms