Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 FER1L4-210ENST00000615531 5998 ntBASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 EGLN1P1-201ENST00000531623 762 ntBASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 TMEM191A-211ENST00000637163 1067 ntBASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
DNAAF1Q8NEP3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 AL024508.2-201ENST00000607749 1894 ntBASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 AL118508.1-201ENST00000613502 2345 ntBASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 MIR1238-201ENST00000408483 83 ntBASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 AL139384.1-201ENST00000612143 3047 ntBASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.65■□□□□ 0.1
DNAAF1Q8NEP3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DNAAF1Q8NEP3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.64■□□□□ 0.09
DNAAF1Q8NEP3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
DNAAF1Q8NEP3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
DNAAF1Q8NEP3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
DNAAF1Q8NEP3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DNAAF1Q8NEP3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DNAAF1Q8NEP3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DNAAF1Q8NEP3 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
DNAAF1Q8NEP3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DNAAF1Q8NEP3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms