Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.7■□□□□ 0.74
BRCA2P51587 CR383656.12-201ENST00000549567 513 ntBASIC19.7■□□□□ 0.74
BRCA2P51587 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC19.7■□□□□ 0.74
BRCA2P51587 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.7■□□□□ 0.74
BRCA2P51587 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.7■□□□□ 0.74
BRCA2P51587 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
BRCA2P51587 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
BRCA2P51587 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRCA2P51587 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.7■□□□□ 0.74
BRCA2P51587 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
BRCA2P51587 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRCA2P51587 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.7■□□□□ 0.74
BRCA2P51587 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
BRCA2P51587 ATP5G2P4-201ENST00000442175 420 ntBASIC19.7■□□□□ 0.74
BRCA2P51587 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.7■□□□□ 0.74
BRCA2P51587 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
BRCA2P51587 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.7■□□□□ 0.74
BRCA2P51587 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCA2P51587 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCA2P51587 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCA2P51587 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCA2P51587 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.69■□□□□ 0.74
BRCA2P51587 BASP1P1-201ENST00000430708 665 ntBASIC19.69■□□□□ 0.74
BRCA2P51587 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
BRCA2P51587 TUBB3P1-201ENST00000405796 1332 ntBASIC19.69■□□□□ 0.74
BRCA2P51587 AC073130.3-201ENST00000624389 2278 ntBASIC19.69■□□□□ 0.74
BRCA2P51587 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
BRCA2P51587 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.69■□□□□ 0.74
BRCA2P51587 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRCA2P51587 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
BRCA2P51587 TIMM8BP1-201ENST00000452384 211 ntBASIC19.69■□□□□ 0.74
BRCA2P51587 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.69■□□□□ 0.74
BRCA2P51587 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.69■□□□□ 0.74
BRCA2P51587 AC023141.13-201ENST00000604991 943 ntBASIC19.69■□□□□ 0.74
BRCA2P51587 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.69■□□□□ 0.74
BRCA2P51587 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.69■□□□□ 0.74
BRCA2P51587 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.69■□□□□ 0.74
BRCA2P51587 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
BRCA2P51587 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCA2P51587 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.69■□□□□ 0.74
BRCA2P51587 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.69■□□□□ 0.74
BRCA2P51587 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCA2P51587 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
BRCA2P51587 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
BRCA2P51587 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
BRCA2P51587 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
BRCA2P51587 COX5BP8-201ENST00000416911 349 ntBASIC19.68■□□□□ 0.74
BRCA2P51587 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.68■□□□□ 0.74
BRCA2P51587 U91328.1-201ENST00000437528 223 ntBASIC19.68■□□□□ 0.74
BRCA2P51587 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.68■□□□□ 0.74
BRCA2P51587 REXO1L3P-201ENST00000622202 1288 ntBASIC19.68■□□□□ 0.74
BRCA2P51587 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.68■□□□□ 0.74
BRCA2P51587 AC126763.1-201ENST00000552015 2118 ntBASIC19.68■□□□□ 0.74
BRCA2P51587 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCA2P51587 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
BRCA2P51587 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCA2P51587 RPS15P9-201ENST00000494093 319 ntBASIC19.68■□□□□ 0.74
BRCA2P51587 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.68■□□□□ 0.74
BRCA2P51587 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.68■□□□□ 0.74
BRCA2P51587 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCA2P51587 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
BRCA2P51587 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
BRCA2P51587 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.67■□□□□ 0.74
BRCA2P51587 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.67■□□□□ 0.74
BRCA2P51587 AL020989.1-201ENST00000422979 469 ntBASIC19.67■□□□□ 0.74
BRCA2P51587 CNN2P2-201ENST00000443536 909 ntBASIC19.67■□□□□ 0.74
BRCA2P51587 CNN2P3-201ENST00000450201 906 ntBASIC19.67■□□□□ 0.74
BRCA2P51587 AL512356.2-201ENST00000546955 174 ntBASIC19.67■□□□□ 0.74
BRCA2P51587 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.67■□□□□ 0.74
BRCA2P51587 AL136317.3-201ENST00000618497 906 ntBASIC19.67■□□□□ 0.74
BRCA2P51587 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 AL033527.4-201ENST00000641026 673 ntBASIC19.67■□□□□ 0.74
BRCA2P51587 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BRCA2P51587 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.67■□□□□ 0.74
BRCA2P51587 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.67■□□□□ 0.74
BRCA2P51587 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.67■□□□□ 0.74
BRCA2P51587 HILS1-202ENST00000545329 423 ntBASIC19.67■□□□□ 0.74
BRCA2P51587 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.67■□□□□ 0.74
BRCA2P51587 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.67■□□□□ 0.74
BRCA2P51587 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
BRCA2P51587 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.67■□□□□ 0.74
BRCA2P51587 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
BRCA2P51587 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
BRCA2P51587 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BRCA2P51587 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
BRCA2P51587 AL353593.2-201ENST00000602529 1483 ntBASIC19.66■□□□□ 0.74
BRCA2P51587 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms