Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC092119.3-201ENST00000612618 583 ntBASIC19.36■□□□□ 0.69
CASP4P49662 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.36■□□□□ 0.69
CASP4P49662 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.36■□□□□ 0.69
CASP4P49662 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CASP4P49662 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.36■□□□□ 0.69
CASP4P49662 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CASP4P49662 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CASP4P49662 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.35■□□□□ 0.69
CASP4P49662 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.35■□□□□ 0.69
CASP4P49662 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
CASP4P49662 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.35■□□□□ 0.69
CASP4P49662 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.35■□□□□ 0.69
CASP4P49662 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.35■□□□□ 0.69
CASP4P49662 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.35■□□□□ 0.69
CASP4P49662 AL138831.2-201ENST00000606564 490 ntBASIC19.35■□□□□ 0.69
CASP4P49662 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.35■□□□□ 0.69
CASP4P49662 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.35■□□□□ 0.69
CASP4P49662 AC141586.5-201ENST00000624546 2050 ntBASIC19.35■□□□□ 0.69
CASP4P49662 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.35■□□□□ 0.69
CASP4P49662 HLA-J-201ENST00000462773 1622 ntBASIC19.35■□□□□ 0.69
CASP4P49662 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.35■□□□□ 0.69
CASP4P49662 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CASP4P49662 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.35■□□□□ 0.69
CASP4P49662 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.35■□□□□ 0.69
CASP4P49662 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CASP4P49662 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.35■□□□□ 0.69
CASP4P49662 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CASP4P49662 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CASP4P49662 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.34■□□□□ 0.69
CASP4P49662 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CASP4P49662 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.34■□□□□ 0.69
CASP4P49662 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.34■□□□□ 0.69
CASP4P49662 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.34■□□□□ 0.69
CASP4P49662 AC097374.2-201ENST00000618617 1306 ntBASIC19.34■□□□□ 0.69
CASP4P49662 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CASP4P49662 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.34■□□□□ 0.69
CASP4P49662 AC007967.3-201ENST00000434308 558 ntBASIC19.34■□□□□ 0.69
CASP4P49662 TOB2P1-201ENST00000469761 992 ntBASIC19.34■□□□□ 0.69
CASP4P49662 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.34■□□□□ 0.69
CASP4P49662 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.34■□□□□ 0.69
CASP4P49662 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.34■□□□□ 0.69
CASP4P49662 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.34■□□□□ 0.69
CASP4P49662 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.34■□□□□ 0.69
CASP4P49662 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.34■□□□□ 0.69
CASP4P49662 BX276092.7-203ENST00000637198 1536 ntBASIC19.34■□□□□ 0.69
CASP4P49662 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.34■□□□□ 0.69
CASP4P49662 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 AL645608.8-201ENST00000606034 2086 ntBASIC19.34■□□□□ 0.69
CASP4P49662 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.34■□□□□ 0.69
CASP4P49662 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CASP4P49662 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CASP4P49662 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.34■□□□□ 0.69
CASP4P49662 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.34■□□□□ 0.69
CASP4P49662 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CASP4P49662 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CASP4P49662 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CASP4P49662 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CASP4P49662 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASP4P49662 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.33■□□□□ 0.69
CASP4P49662 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CASP4P49662 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
CASP4P49662 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CASP4P49662 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
CASP4P49662 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CASP4P49662 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CASP4P49662 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CASP4P49662 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CASP4P49662 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms