Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
KRT6CP48668 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.24■□□□□ 0.35
KRT6CP48668 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT6CP48668 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KRT6CP48668 AL356309.3-201ENST00000624132 1934 ntBASIC17.24■□□□□ 0.35
KRT6CP48668 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
KRT6CP48668 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
KRT6CP48668 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.24■□□□□ 0.35
KRT6CP48668 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT6CP48668 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
KRT6CP48668 HLA-F-220ENST00000434407 884 ntBASIC17.24■□□□□ 0.35
KRT6CP48668 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 DDX43P3-201ENST00000441064 443 ntBASIC17.24■□□□□ 0.35
KRT6CP48668 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KRT6CP48668 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.24■□□□□ 0.35
KRT6CP48668 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.24■□□□□ 0.35
KRT6CP48668 AC009154.2-201ENST00000621177 724 ntBASIC17.24■□□□□ 0.35
KRT6CP48668 AC011558.1-201ENST00000623459 338 ntBASIC17.24■□□□□ 0.35
KRT6CP48668 AC097493.4-201ENST00000641197 219 ntBASIC17.24■□□□□ 0.35
KRT6CP48668 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
KRT6CP48668 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
KRT6CP48668 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.24■□□□□ 0.35
KRT6CP48668 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
KRT6CP48668 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
KRT6CP48668 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
KRT6CP48668 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
KRT6CP48668 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KRT6CP48668 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6CP48668 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT6CP48668 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6CP48668 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6CP48668 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT6CP48668 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT6CP48668 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
KRT6CP48668 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KRT6CP48668 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 TERF1P1-201ENST00000311003 1181 ntBASIC17.23■□□□□ 0.35
KRT6CP48668 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6CP48668 SPDYE15P-201ENST00000424157 909 ntBASIC17.23■□□□□ 0.35
KRT6CP48668 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
KRT6CP48668 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 AC139887.4-201ENST00000607877 719 ntBASIC17.23■□□□□ 0.35
KRT6CP48668 AC012306.2-201ENST00000609350 630 ntBASIC17.23■□□□□ 0.35
KRT6CP48668 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.23■□□□□ 0.35
KRT6CP48668 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 AC009949.1-201ENST00000623048 1830 ntBASIC17.23■□□□□ 0.35
KRT6CP48668 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
KRT6CP48668 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.23■□□□□ 0.35
KRT6CP48668 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
KRT6CP48668 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6CP48668 AL138688.1-201ENST00000624851 1594 ntBASIC17.23■□□□□ 0.35
KRT6CP48668 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6CP48668 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
KRT6CP48668 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.23■□□□□ 0.35
KRT6CP48668 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6CP48668 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6CP48668 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.22■□□□□ 0.35
KRT6CP48668 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
KRT6CP48668 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6CP48668 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.22■□□□□ 0.35
KRT6CP48668 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.22■□□□□ 0.35
KRT6CP48668 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.22■□□□□ 0.35
KRT6CP48668 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
KRT6CP48668 TSPY12P-201ENST00000421279 868 ntBASIC17.22■□□□□ 0.35
KRT6CP48668 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms