Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.19■□□□□ 0.66
TNFSF9P41273 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFSF9P41273 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
TNFSF9P41273 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.19■□□□□ 0.66
TNFSF9P41273 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF9P41273 AC106795.1-205ENST00000512851 1056 ntBASIC19.19■□□□□ 0.66
TNFSF9P41273 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.19■□□□□ 0.66
TNFSF9P41273 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
TNFSF9P41273 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TNFSF9P41273 AC008608.2-201ENST00000606089 416 ntBASIC19.19■□□□□ 0.66
TNFSF9P41273 TP73-AS1-207ENST00000624167 988 ntBASIC19.19■□□□□ 0.66
TNFSF9P41273 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFSF9P41273 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF9P41273 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFSF9P41273 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.19■□□□□ 0.66
TNFSF9P41273 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TNFSF9P41273 AL049757.1-201ENST00000616842 1596 ntBASIC19.19■□□□□ 0.66
TNFSF9P41273 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.19■□□□□ 0.66
TNFSF9P41273 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TNFSF9P41273 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFSF9P41273 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNFSF9P41273 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TNFSF9P41273 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 FAAHP1-202ENST00000446499 1238 ntBASIC19.18■□□□□ 0.66
TNFSF9P41273 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.18■□□□□ 0.66
TNFSF9P41273 MTDHP3-201ENST00000594186 672 ntBASIC19.18■□□□□ 0.66
TNFSF9P41273 AL121912.1-201ENST00000603683 238 ntBASIC19.18■□□□□ 0.66
TNFSF9P41273 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TNFSF9P41273 AD001527.2-201ENST00000622994 785 ntBASIC19.18■□□□□ 0.66
TNFSF9P41273 AP000867.4-201ENST00000641616 219 ntBASIC19.18■□□□□ 0.66
TNFSF9P41273 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TNFSF9P41273 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TNFSF9P41273 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.18■□□□□ 0.66
TNFSF9P41273 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TNFSF9P41273 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TNFSF9P41273 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNFSF9P41273 KRT8P10-201ENST00000450021 1447 ntBASIC19.17■□□□□ 0.66
TNFSF9P41273 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFSF9P41273 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFSF9P41273 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFSF9P41273 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFSF9P41273 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNFSF9P41273 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 FGFR3P6-201ENST00000457012 610 ntBASIC19.17■□□□□ 0.66
TNFSF9P41273 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.17■□□□□ 0.66
TNFSF9P41273 AL355877.3-201ENST00000622820 899 ntBASIC19.17■□□□□ 0.66
TNFSF9P41273 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TNFSF9P41273 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.17■□□□□ 0.66
TNFSF9P41273 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNFSF9P41273 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.17■□□□□ 0.66
TNFSF9P41273 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TNFSF9P41273 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
TNFSF9P41273 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TNFSF9P41273 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
TNFSF9P41273 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
TNFSF9P41273 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TNFSF9P41273 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.16■□□□□ 0.66
TNFSF9P41273 SLC25A6P5-201ENST00000435663 894 ntBASIC19.16■□□□□ 0.66
TNFSF9P41273 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.16■□□□□ 0.66
TNFSF9P41273 AC009078.2-202ENST00000463353 338 ntBASIC19.16■□□□□ 0.66
TNFSF9P41273 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms