Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AL162727.3-201ENST00000635661 2787 ntBASIC15.52■□□□□ 0.07
GDNFP39905 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
GDNFP39905 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
GDNFP39905 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.51■□□□□ 0.07
GDNFP39905 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.51■□□□□ 0.07
GDNFP39905 AC093010.1-201ENST00000473625 1624 ntBASIC15.51■□□□□ 0.07
GDNFP39905 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.51■□□□□ 0.07
GDNFP39905 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.51■□□□□ 0.07
GDNFP39905 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
GDNFP39905 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.51■□□□□ 0.07
GDNFP39905 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.51■□□□□ 0.07
GDNFP39905 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.51■□□□□ 0.07
GDNFP39905 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.51■□□□□ 0.07
GDNFP39905 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
GDNFP39905 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
GDNFP39905 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.51■□□□□ 0.07
GDNFP39905 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 AC008622.2-201ENST00000617006 1229 ntBASIC15.51■□□□□ 0.07
GDNFP39905 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.51■□□□□ 0.07
GDNFP39905 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 FER1L4-210ENST00000615531 5998 ntBASIC15.51■□□□□ 0.07
GDNFP39905 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
GDNFP39905 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.51■□□□□ 0.07
GDNFP39905 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
GDNFP39905 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
GDNFP39905 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.5■□□□□ 0.07
GDNFP39905 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.5■□□□□ 0.07
GDNFP39905 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
GDNFP39905 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
GDNFP39905 PCDHA14-201ENST00000506751 2298 ntBASIC15.5■□□□□ 0.07
GDNFP39905 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
GDNFP39905 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GDNFP39905 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.5■□□□□ 0.07
GDNFP39905 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
GDNFP39905 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
GDNFP39905 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.49■□□□□ 0.07
GDNFP39905 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
GDNFP39905 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 AC099343.3-201ENST00000605834 2503 ntBASIC15.49■□□□□ 0.07
GDNFP39905 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.49■□□□□ 0.07
GDNFP39905 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.49■□□□□ 0.07
GDNFP39905 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GDNFP39905 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
GDNFP39905 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.49■□□□□ 0.07
GDNFP39905 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.49■□□□□ 0.07
GDNFP39905 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.49■□□□□ 0.07
GDNFP39905 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
GDNFP39905 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.49■□□□□ 0.07
GDNFP39905 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
GDNFP39905 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
GDNFP39905 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms